| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2760 |
|---|
| Symbol | |
|---|
| ID | 5107556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3035306 |
|---|
| End bp | 3035809 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640504010 |
|---|
| Product | ureidoglycolate hydrolase |
|---|
| Protein accession | YP_001188247 |
|---|
| Protein GI | 146307782 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG3194] Ureidoglycolate hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.607298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.437798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAGCC TGACCATCGA GCCCCTGAGC AAAGAAGCCT TCGCCGCCTT CGGTGACGTG
ATCGAAACCG ACGGCAGCGA CTTCTTCATG ATCAACAACG GCTCCACCCG CCGCTATCAC
AAGCTGGCCA CCGTGGAGAC CGCGCAGCCG GAGGACAAGG CCATCATCAG CATCTTCAGC
GCCGAAGCCC TGGAGATGCC GCTGACCATC CGCATGCTGG AACGCCATCC GCTGGGCAGC
CAGGCCTTTA TCCCGCTGCT CGGCAACCCC TTTCTGATCG TGGTCGCGCC ACTTGGCGAT
GTACCTGTAT CAGGGTCCGT CCGTGCCTTC CTCAGCAATG GCAGGCAGGG CGTCAATTAC
CATCGCGGCG TCTGGCACCA CCCGGTGCTG ACGATCGAAA AGCGGGATGA CTTCCTGGTG
GTTGATCGCA GTGGTTCCGG CAACAACTGC GATGAGCATT TCTTCAATGA GGACGAACTC
CTTCTCCTCA ACCCCCACCA ATAA
|
|---|
| Protein sequence | MRSLTIEPLS KEAFAAFGDV IETDGSDFFM INNGSTRRYH KLATVETAQP EDKAIISIFS
AEALEMPLTI RMLERHPLGS QAFIPLLGNP FLIVVAPLGD VPVSGSVRAF LSNGRQGVNY
HRGVWHHPVL TIEKRDDFLV VDRSGSGNNC DEHFFNEDEL LLLNPHQ
|
|---|
| |