Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2759 |
Symbol | |
ID | 5107555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3034730 |
End bp | 3035260 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504009 |
Product | hypothetical protein |
Protein accession | YP_001188246 |
Protein GI | 146307781 |
COG category | [S] Function unknown |
COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.659678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.346788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGAGC CGTCCATGAG CCGTTTCCAG ACCCTGACCC CTTCCAAGCT GAGCCGCGAG GAGTTCATCA AGGCCTTCGC CGACATCTAC GAGCACTCGC CCTGGGTGGC CGAGAAGGCT TACGACCTCG GCATGGACGC GTCGGTAGAC GAGATCGACG GCCTGCAGCA GCGCATGGCC GACATCCTCC TGTCCGCCAG TCATGAGGCG CAGCTGGCGC TGATCAACGC GCACCCGGAC CTGGCCGGCA AGGCTGCAGT GCGTGGCGAG CTGACCGCTT CGAGCACCGC CGAACAGTCC GGCGCCGGCA TCCACGAATG CACCGCCGAG GAGTTCGCCC GTTTCACCGA ACTCAACGAC GCCTACAAGG CGAAGTTCGG CTTCCCCTTC ATCAAGGCCG TCAAGGGCAG CAACCGCCAC CAGATCCTGG CCGCCTTCGA GGAGCGCATT CACAACACGC CGGAGCAGGA ATTCGCCACC GCCCTGGCCG AGATCAACAA GATCGCCCTC TTCCGTCTGC AGCAGCTGTA A
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Protein sequence | MREPSMSRFQ TLTPSKLSRE EFIKAFADIY EHSPWVAEKA YDLGMDASVD EIDGLQQRMA DILLSASHEA QLALINAHPD LAGKAAVRGE LTASSTAEQS GAGIHECTAE EFARFTELND AYKAKFGFPF IKAVKGSNRH QILAAFEERI HNTPEQEFAT ALAEINKIAL FRLQQL
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