Gene Pmen_2759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2759 
Symbol 
ID5107555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3034730 
End bp3035260 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID640504009 
Producthypothetical protein 
Protein accessionYP_001188246 
Protein GI146307781 
COG category[S] Function unknown 
COG ID[COG3195] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03164] OHCU decarboxylase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.659678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.346788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGAGC CGTCCATGAG CCGTTTCCAG ACCCTGACCC CTTCCAAGCT GAGCCGCGAG 
GAGTTCATCA AGGCCTTCGC CGACATCTAC GAGCACTCGC CCTGGGTGGC CGAGAAGGCT
TACGACCTCG GCATGGACGC GTCGGTAGAC GAGATCGACG GCCTGCAGCA GCGCATGGCC
GACATCCTCC TGTCCGCCAG TCATGAGGCG CAGCTGGCGC TGATCAACGC GCACCCGGAC
CTGGCCGGCA AGGCTGCAGT GCGTGGCGAG CTGACCGCTT CGAGCACCGC CGAACAGTCC
GGCGCCGGCA TCCACGAATG CACCGCCGAG GAGTTCGCCC GTTTCACCGA ACTCAACGAC
GCCTACAAGG CGAAGTTCGG CTTCCCCTTC ATCAAGGCCG TCAAGGGCAG CAACCGCCAC
CAGATCCTGG CCGCCTTCGA GGAGCGCATT CACAACACGC CGGAGCAGGA ATTCGCCACC
GCCCTGGCCG AGATCAACAA GATCGCCCTC TTCCGTCTGC AGCAGCTGTA A
 
Protein sequence
MREPSMSRFQ TLTPSKLSRE EFIKAFADIY EHSPWVAEKA YDLGMDASVD EIDGLQQRMA 
DILLSASHEA QLALINAHPD LAGKAAVRGE LTASSTAEQS GAGIHECTAE EFARFTELND
AYKAKFGFPF IKAVKGSNRH QILAAFEERI HNTPEQEFAT ALAEINKIAL FRLQQL