| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2758 |
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| Symbol | |
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| ID | 5107554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3033807 |
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| End bp | 3034733 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504008 |
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| Product | chitin deacetylase |
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| Protein accession | YP_001188245 |
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| Protein GI | 146307780 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.373365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.21218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGCTG ATTACCCACG CGATTTGATC GGCTACGGCG CCAACCCGCC CCATCCGCAC
TGGCCGGGCG ATGCCCGCAT CGCCCTGTCC TTCGTGCTCA ATTACGAGGA AGGCGGCGAG
CGCAACATCC TCCATGACGA CAAGGAATCC GAGGCCTTTC TCTCCGAAAT GGTCGCCGCC
CAGCCACTGC AGGGCCAGCG CAACCTGTGC ATGGAGTCGC TCTACGAGTA CGGCAGCCGC
GCCGGTGTCT GGCGCCTGCT CGAGCTGTTC AAGAAGCACG ACATCCCGCT GACCATCTTC
GCCGTGGCCA TGGCCGCCCA GCGTCACCCC GAGGTGATCA AGCAGATGGT CGCCGCCGGC
CACGAGATCT GCAGCCACGG TTACCGCTGG ATCGACTATC AGAACGTCGA CGAAACCACC
GAGCGCGAGC ATATGCTCGA GGCCATCCGC ATCCTCACCG AGCTGACCGG CGAGCGCCCG
CTGGGCTGGT ATACCGGCCG CCTGGGGCCG AACACCCGGC GCATCGTGCG CGAAGAAGGC
GGCTTCCTCT ACGACTCCGA CACCTACGAC GACGACCTGC CCTACTGGGA CCCGGCCAGC
ACCGCGGAGA AGCCGCACCT GGTGATCCCC TACACCCTGG ACACCAACGA CATGCGCTTC
ACCCAGGTGC AGGGCTTCAA CAAGGGCGAC GATTTCTTCG AATACCTCAA GGATGCCTTC
GACGTGCTCT ACGCCGAAGG CCAGGCAGGC GCTCCGAAGA TGCTGTCGAT CGGTATGCAC
TGCCGCCTGC TCGGCCGTCC GGCGCGCCTG GCCTCGCTGG CGCGCTTCAT CGACTACGTG
AAGAGCCATG ACAAGGTCTG GTGCGCCCGC CGCGTCGACA TCGCCAGGCA CTGGCACGCC
ACCCACCCCT TCCGCGCGAC CGAATGA
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| Protein sequence | MNADYPRDLI GYGANPPHPH WPGDARIALS FVLNYEEGGE RNILHDDKES EAFLSEMVAA
QPLQGQRNLC MESLYEYGSR AGVWRLLELF KKHDIPLTIF AVAMAAQRHP EVIKQMVAAG
HEICSHGYRW IDYQNVDETT EREHMLEAIR ILTELTGERP LGWYTGRLGP NTRRIVREEG
GFLYDSDTYD DDLPYWDPAS TAEKPHLVIP YTLDTNDMRF TQVQGFNKGD DFFEYLKDAF
DVLYAEGQAG APKMLSIGMH CRLLGRPARL ASLARFIDYV KSHDKVWCAR RVDIARHWHA
THPFRATE
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