| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2757 |
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| Symbol | |
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| ID | 5107553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3033051 |
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| End bp | 3033404 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640504007 |
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| Product | transthyretin |
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| Protein accession | YP_001188244 |
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| Protein GI | 146307779 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2351] Transthyretin-like protein |
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| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.489231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.166058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGTT TGACTACGCA TGTACTGGAC GCCGCACACG GCTGCCCAGG GAGTGACATC
AAGGTCGAGC TGTATCGCGT CGAAGGCGCG CAGCTGGAGC TGATCAACAG CGTGACCACC
AACCACGACG GCCGTTGCGA TGCGCCTGTG CTGCAGGGCG ATGACTACCG CACGGGCGTG
TATCAGCTGC ACTTCCATGC CGGCGACTAC TACCGTGCCC GTGGCGTGAA ACTGCCCGAG
CCGGCCTTCC TCGATGTGGT GGTACTGCGC TTCGGCATCG ATGCCGGCCA GGAGCACTAC
CACGTGCCGC TCCTGATTTC CCCTTACAGC TACTCCACCT ACCGCGGTAG CTGA
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| Protein sequence | MGRLTTHVLD AAHGCPGSDI KVELYRVEGA QLELINSVTT NHDGRCDAPV LQGDDYRTGV
YQLHFHAGDY YRARGVKLPE PAFLDVVVLR FGIDAGQEHY HVPLLISPYS YSTYRGS
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