Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2755 |
Symbol | |
ID | 5107551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3030057 |
End bp | 3030824 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640504005 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001188242 |
Protein GI | 146307777 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.253691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC AATTGCAGCC ACTGAAGAAG CAGCCGCGTG CGGGCAAAAG CAGCCGCAGC GGGACTCAGG ACGATGTCGT ATATGCCCAC ATTTTCGATG CCATTCTCGA GCAGCGCCTG GCGCCCGGCA CCAAGCTGAG CGAAGAGGCG CTGGGCGAGA TCTTCGGCGT CAGCCGCACC ATCATTCGCC GCGCCCTGTC GCGCCTGGCC CACGAGGGTG TGGTGCTGCT GCGCCCTAAC CGCGGTGCGG TGGTGGCCAG TCCCAGTGTC GAAGAAGCCC GGCAGATCTT CTATGCGCGC CGCCTGGTCG AGCGGGCCAT CACCGAGCTG GCCGTCGAGC ATGCCACCGC CGAGCAACTG GCCGAGCTGC GGCAGATGGT CAAGGACGAG CAGGACAGCT TCTCCCGCGG TGATCGTGGT GCCGGCATCC GTCTGTCCGG CGAGTTCCAC CTGAAGCTGG CCGAGGCCGC GCGTAATGCG CCGCTGGTGA GCTTCCAGCG CAGCCTGGTG TCGCAGACCT CGCTGATCAT CGCCCAGTAT GAAAGTGGCA GCCGCTCGCA TTGCTCTTAC GACGAACACA ACCAGTTGAT CGACGCCATC GAGGCGCGCG ATGCCGAGCG TGCGGTGCAC CTGATGATGC ACCACATGGA TCACATCGAC AGCAAGCTCA ACCTGGACGA GGAAAGCGCC TCGGACGATC TGCACGCGGT GTTCTCGCAC CTGCTGCAGA CCAAGAAGAA GCCGGGCCGC AGCGCCGCCA ATCGCTGA
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Protein sequence | MNDQLQPLKK QPRAGKSSRS GTQDDVVYAH IFDAILEQRL APGTKLSEEA LGEIFGVSRT IIRRALSRLA HEGVVLLRPN RGAVVASPSV EEARQIFYAR RLVERAITEL AVEHATAEQL AELRQMVKDE QDSFSRGDRG AGIRLSGEFH LKLAEAARNA PLVSFQRSLV SQTSLIIAQY ESGSRSHCSY DEHNQLIDAI EARDAERAVH LMMHHMDHID SKLNLDEESA SDDLHAVFSH LLQTKKKPGR SAANR
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