| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2754 |
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| Symbol | |
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| ID | 5107550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3028619 |
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| End bp | 3029920 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504004 |
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| Product | guanine deaminase |
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| Protein accession | YP_001188241 |
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| Protein GI | 146307776 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.481519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCG ATATCAAAGC CTACCGCGCC GCCATCCTGC ACAGCCTCGC CGACCCCGCC
GTGGTCGGTG TCGAGCAGTC CTACAAATAT TTCGAGGACG GCATCCTGCT GATCGAAAAC
GGCAAGGTCG CCCAGGTTGG CCCCGCCGCC GAGCTGTTGC CGAAGCTGGC CGGCGTCGAC
GTCCAGCACT ACCGCGACGC GCTGATCACC CCCGGCTTCA TCGACACCCA TATCCACTAC
CCGCAGACCG GCATGATCGC CTCCTACGGC GAGCAGTTGC TGGACTGGCT CAACACCTAC
ACCTTCCCTA CCGAGCGGCA GTTCGAAGAC AAGGCCCATG CCAGCGACGT GGCGGCGATC
TTCCTCAAGG AACTGCTGCG CAACGGCACC ACCACCGCCC TGGTGTTCGG CACCGTGCAC
CCACAGTCGG TGGATGCCTT CTTCGAACAG GCCGACAAGC TCAACCTGCG CATGATCGCC
GGCAAGGTGC TGATGGATCG CAACGCCCCG GACTACCTGA CCGACACAGC CGAGTCCGGC
TACGCCGAGA GCAAGGCACT GATCGAGCGT TGGCACGGCA AGGGCCGCCT GCACTATGCG
GTCACCCCGC GCTTCGCCCC GACCAGTACG CCGGAGCAAC TGGAACTGGC CGGCAAGCTG
CTGGGCGAGT ACCCGGACCT GTACATGCAC ACCCACCTGT CCGAGAACCG CAAGGAAATC
GAATGGGTCA AGGAACTGTT TCCCGAGCGC AAGGGCTACC TGGACGTCTA CGACCACCAC
AAGCTGATCG GCCCGCGCGC GGTGTTCGCC CATGGCGTGC ACCTGTGCGA CGACGAGTGC
AAGCGCCTCG CCGAAACCGG CTCGGCGGTG GCCTTCTGCC CCACCTCCAA CCTGTTCCTC
GGTAGCGGCC TGTTCGACCT GAACAAGCTG GAAGCCCATG GCGTGCGCGT CGGGCTGGGT
ACCGATGTCG GCGCCGGCAC CAGCTTCAGC CAGCTGCAAT CGCTGAACGA GGCGTACAAG
ATCATGCAGT TGCAGGGCAA GAAGCTCGAT CCCTTCAAGT CGCTGTACCT GGCCACCCTG
GGCGGTGCCA ACGCCCTGTA CCTGGACGAC AAGCTGGGCA ACTTCCTGCC CGGCAAGGAC
GCCGACTTCC TGGTGCTGGA CTACAACGCC ACACCGCTGA TGAGCTACCG CATGCAGCAG
GCCAGGAGCC TGGAGGAACG ACTGTTCGCC CTGACCATGC TCGGCGATGA TCGCGCGGTG
AAGGAGACCT TCGCCGCGGG CGTGTCAGTG CACGAGCGCT AG
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| Protein sequence | MTTDIKAYRA AILHSLADPA VVGVEQSYKY FEDGILLIEN GKVAQVGPAA ELLPKLAGVD
VQHYRDALIT PGFIDTHIHY PQTGMIASYG EQLLDWLNTY TFPTERQFED KAHASDVAAI
FLKELLRNGT TTALVFGTVH PQSVDAFFEQ ADKLNLRMIA GKVLMDRNAP DYLTDTAESG
YAESKALIER WHGKGRLHYA VTPRFAPTST PEQLELAGKL LGEYPDLYMH THLSENRKEI
EWVKELFPER KGYLDVYDHH KLIGPRAVFA HGVHLCDDEC KRLAETGSAV AFCPTSNLFL
GSGLFDLNKL EAHGVRVGLG TDVGAGTSFS QLQSLNEAYK IMQLQGKKLD PFKSLYLATL
GGANALYLDD KLGNFLPGKD ADFLVLDYNA TPLMSYRMQQ ARSLEERLFA LTMLGDDRAV
KETFAAGVSV HER
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