| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2734 |
|---|
| Symbol | |
|---|
| ID | 5107885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3001230 |
|---|
| End bp | 3002150 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640503984 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001188221 |
|---|
| Protein GI | 146307756 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCTGG ATGACGCGCT GATATTTACC CGAGTGGTGG AGTGCCACAG TTTCACCCAG
GCTGCGACCA GCCTGGGCAT GCAGAAATCC ACGGTAAGCC GACGTATCGC GCTGCTCGAA
GAGCGTCTGG GTGTGCGCCT GCTCAACCGG ACGACGCGCA AGTTGCGCCT CACCGAGGTG
GGGCAGGCCT ACTACGAGCG CTGTCGGCAG ATCATGCTCG ACTTCGCCGA GGCCGAGCAG
GCGGTGATGC AGCTGCAGCG CGAGCCGTCG GGGCTGTTGC GCATCACCTC ACCCATCGAA
TTCGGCCAGC TTTTTCTCGG GCGAGTGCTG GGTGAGTTCA TGCGCCAGTA CCCGCAGATC
GACGCCGAGG TGGAGCTGAC CTCGCGCTCG GTGGACCCGC TGGAAGAGGG CGTGGACATC
GCCATCCAGG TCGGCCAGCC GCAGGATTCC ACGCTGATCG CGCGCAAGTT GTTCGAAAGT
GGCCGGCGTC TGTGCGCCAG TCCTGCTTAC CTGGCGGCGC ACGGTACGCC GCGCAGCGTC
GCCGAGCTGG AGGGGCATCG GGCGATCCTC CTGCAGCACG ATGCCCCACG CTACTGGCCG
CTGCTGGGCG AGCATCTGCC CTGCCAGCGG GTGATGACCT GCAACAACAT CACCTTTGCC
CGCGAGGCGA CCCTGGCCGG TGCGGGTATC TCCGGGCTGC CGGTAATGAT CAGCGAGGAG
GCGGTGCGCA GTGGGCGCCT GGTCGAGCTG TTGCCCGAGG CGCGCCTGCC GGTGGGGGAG
GTGTACGCCA TCTACCCGTC GCGGCGCTTC CAGGCGATGA AGGTCAAGAC CTTCCTCGAC
TTTCTCATCG CCAGCTTGCC CATCACCCGC GGCGGCCTGC TGGAGCCGGG GGGCGCCGGC
CTGCTAACAT CGCCCGCTTG A
|
|---|
| Protein sequence | MGLDDALIFT RVVECHSFTQ AATSLGMQKS TVSRRIALLE ERLGVRLLNR TTRKLRLTEV
GQAYYERCRQ IMLDFAEAEQ AVMQLQREPS GLLRITSPIE FGQLFLGRVL GEFMRQYPQI
DAEVELTSRS VDPLEEGVDI AIQVGQPQDS TLIARKLFES GRRLCASPAY LAAHGTPRSV
AELEGHRAIL LQHDAPRYWP LLGEHLPCQR VMTCNNITFA REATLAGAGI SGLPVMISEE
AVRSGRLVEL LPEARLPVGE VYAIYPSRRF QAMKVKTFLD FLIASLPITR GGLLEPGGAG
LLTSPA
|
|---|
| |