| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2733 |
|---|
| Symbol | gltX |
|---|
| ID | 5107272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2999714 |
|---|
| End bp | 3001195 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640503983 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_001188220 |
|---|
| Protein GI | 146307755 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.565798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG TCCGTACCCG TATCGCGCCT TCGCCGACTG GCGATCCCCA TGTCGGCACT
GCCTACATCG CACTGTTCAA CCTGTGCTTC GCTCGCCAGC ACGGCGGTCA GTTCATCCTG
CGTATCGAAG ACACCGACCA GCTGCGTTCG ACCCGCGAGT CCGAGCAGCA GATCTTCGAC
GCCCTGCGCT GGCTGGGCAT CGAGTGGGAC GAGGGCCCGG ACGTTGGCGG CCCGCATGGC
CCGTATCGGC AGAGCGAGCG CGGCGAGATC TACAAGCAGT ATTCGGACGA ACTGGTCGCC
AAGGGCCATG CCTTCCCGTG CTTCTGCTCC GCCGAGCGCC TCGATGAAGT GCGTGCGCAG
CAGATGGCCA ACAAGGAAAC CCCGCGTTAC GACGGCCACT GCATGCACCT CGATCCGGCC
GAGGCGCAGC GCCGCATCGC CGCAGGCGAG TCGCACGTGG TGCGCATGAA GGTGCCGAGC
GAAGGCGTCT GCGTGGTGCC GGACATGCTG CGTGGCGATG TCGAGATCCC CTGGGATCGC
ATGGACATGC AGGTGCTGAT GAAGGCCGAT GGCCTACCGA CCTACTTCCT GGCCAACGTG
GTCGATGACC ACCTGATGGG CATCACCCAT GTACTGCGCG GCGAGGAATG GCTGCCGTCG
GCGCCCAAGC TGATCAAGCT GTACGAGTAC TTCGGCTGGG AACAGCCGGC GCTGTGCTAT
ATGCCGCTGC TGCGCAATCC GGACAAGAGC AAGCTGTCCA AGCGCAAGAA CCCCACCAGC
ATCACCTTCT ACGAGCGCAT GGGCTACCTG CCGCAGGCCA TGCTCAACTA CCTCGGCCGC
ATGGGCTGGT CGATGCCGGA CGAGCGCGAG AAATTCTCCC TGAACGAGAT GATCGAGCAC
TTCGACATCA ACCGCGTGTC GCTGGGCGGG CCGATCTTCG ATCTGGAGAA GCTGTCCTGG
CTCAACGGCC AGTGGCTGCG CGAGCTGCCG GTGGAAACCT TCGCCGCGGA AGTGCAGAAA
TGGGCGCTCA ACCCCGAGTA CCTGATGAAG ATCGCGCCGC ACGTGCAGGG CAGGGTGGAA
ACCTTCAGCC AGATCGCACC GCTGGCCGGC TTCTTCTTCT CCGGCGCGCT GAACCTGGAC
GCCAAGCTGT TCGAGCACAA GAAGCTGTCG CCCGACCAGG TGCGCCAGCT GATGCAGCTG
ATCCTGTGGA AGCTCGAGTC GCTGCGCCAG TGGGAAAAGG AGCGCATCAC CGGCTGCATC
CAGGCGGTGG TCGAGCACCT GGAACTGAAG CTGCGTGACG CCATGCCACT GATGTTCGCC
GCCATCACCG GCCAGGCCAG CTCGGTGTCG GTGCTCGATG CCATGGAAAT CCTCGGCCCG
GATCTGACCC GCTTCCGCCT GCGCCAGGCG CTGGAGCTGC TCGGCGGCAC CTCGAAGAAA
GAGACCAAGG AGTGGGAGAA GCTGCTGGCG AGCATCGCCT GA
|
|---|
| Protein sequence | MTTVRTRIAP SPTGDPHVGT AYIALFNLCF ARQHGGQFIL RIEDTDQLRS TRESEQQIFD
ALRWLGIEWD EGPDVGGPHG PYRQSERGEI YKQYSDELVA KGHAFPCFCS AERLDEVRAQ
QMANKETPRY DGHCMHLDPA EAQRRIAAGE SHVVRMKVPS EGVCVVPDML RGDVEIPWDR
MDMQVLMKAD GLPTYFLANV VDDHLMGITH VLRGEEWLPS APKLIKLYEY FGWEQPALCY
MPLLRNPDKS KLSKRKNPTS ITFYERMGYL PQAMLNYLGR MGWSMPDERE KFSLNEMIEH
FDINRVSLGG PIFDLEKLSW LNGQWLRELP VETFAAEVQK WALNPEYLMK IAPHVQGRVE
TFSQIAPLAG FFFSGALNLD AKLFEHKKLS PDQVRQLMQL ILWKLESLRQ WEKERITGCI
QAVVEHLELK LRDAMPLMFA AITGQASSVS VLDAMEILGP DLTRFRLRQA LELLGGTSKK
ETKEWEKLLA SIA
|
|---|
| |