Gene Pmen_2732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2732 
Symbol 
ID5107883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2998105 
End bp2998644 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content68% 
IMG OID640503976 
ProductTetR family transcriptional regulator 
Protein accessionYP_001188219 
Protein GI146307754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.748169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG GCAAGATTCA AACCCGCAAA CGCATTCTCG CTGCTGCGCA GCGCGTGCTT 
GCAGAGCGCG GCCCCAGCGA TCCCGCGGTC GCGGAGGTGA TGGCCGCTGC AGGGCTGACG
GTGGGGGGCT TCTACGCCCA TTTCCCCAGC AAGGACGCCC TGATGCTCGA GGCCTTCCGT
CAGTTGCTCA GCGCACGGCG CGAGGGGGTG GCAGCGGTCG ATCCGAAACT CGCCGGCGTG
GACCGCAGGG CCCTGATGGC GGCGTTCTAC CTGTCGCGTC GGCATCGCGA CACGCCTGAA
GCCTGTTGCC CGCTGCCCAG CTCGCTGGCG GAAATCGCGC GCATGCCGGA CGGCTTTCGT
CAGGTCCTGG CCGAACACAT TGAATTGATG GTGGCGCAGA TGAGCAGTGC GCCAGAAGAG
GCGAATGCGG CGCTGGCTGA CCTGGCGCTG ATGGTGGGTG GTCTGGCTCT GGCCCGGGCG
CTGGGCCCCG GCGAGCTGTC CGACCGTGTG TTGCGTGCTG CCAAGTCGGC AGTGGTGTGA
 
Protein sequence
MSDGKIQTRK RILAAAQRVL AERGPSDPAV AEVMAAAGLT VGGFYAHFPS KDALMLEAFR 
QLLSARREGV AAVDPKLAGV DRRALMAAFY LSRRHRDTPE ACCPLPSSLA EIARMPDGFR
QVLAEHIELM VAQMSSAPEE ANAALADLAL MVGGLALARA LGPGELSDRV LRAAKSAVV