Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2732 |
Symbol | |
ID | 5107883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2998105 |
End bp | 2998644 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640503976 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001188219 |
Protein GI | 146307754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.748169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG GCAAGATTCA AACCCGCAAA CGCATTCTCG CTGCTGCGCA GCGCGTGCTT GCAGAGCGCG GCCCCAGCGA TCCCGCGGTC GCGGAGGTGA TGGCCGCTGC AGGGCTGACG GTGGGGGGCT TCTACGCCCA TTTCCCCAGC AAGGACGCCC TGATGCTCGA GGCCTTCCGT CAGTTGCTCA GCGCACGGCG CGAGGGGGTG GCAGCGGTCG ATCCGAAACT CGCCGGCGTG GACCGCAGGG CCCTGATGGC GGCGTTCTAC CTGTCGCGTC GGCATCGCGA CACGCCTGAA GCCTGTTGCC CGCTGCCCAG CTCGCTGGCG GAAATCGCGC GCATGCCGGA CGGCTTTCGT CAGGTCCTGG CCGAACACAT TGAATTGATG GTGGCGCAGA TGAGCAGTGC GCCAGAAGAG GCGAATGCGG CGCTGGCTGA CCTGGCGCTG ATGGTGGGTG GTCTGGCTCT GGCCCGGGCG CTGGGCCCCG GCGAGCTGTC CGACCGTGTG TTGCGTGCTG CCAAGTCGGC AGTGGTGTGA
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Protein sequence | MSDGKIQTRK RILAAAQRVL AERGPSDPAV AEVMAAAGLT VGGFYAHFPS KDALMLEAFR QLLSARREGV AAVDPKLAGV DRRALMAAFY LSRRHRDTPE ACCPLPSSLA EIARMPDGFR QVLAEHIELM VAQMSSAPEE ANAALADLAL MVGGLALARA LGPGELSDRV LRAAKSAVV
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