| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2728 |
|---|
| Symbol | |
|---|
| ID | 5107879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 2994361 |
|---|
| End bp | 2994756 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640503972 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001188215 |
|---|
| Protein GI | 146307750 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.392441 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.179317 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGCA TCATGCTCAT GGTTTTCGGC CTGCTCGCTA GCGGCGCACT GGCCGCCGAT
CCCCTGCCGC GCGGCGTCGA ACACATGCCC GCCGACGCCG CGAGCGATGC CCCGGCGCGC
CTGATCTTCA GCCGCGACAG CAACGCGCCC AACGCCTGCG ACGTCGAGCT CTACGTCAAC
CAGCAGGTGG TCGCCACGCT GGGGCCGGGA GAGCGCACCA GCCTCGACCT GCCCAGCGGC
GAGCTGAGCC TCGCGGTAGC CCTGTCGCCA AGCGGCTATT GCGGCGGCCG CGGCCCGGAC
GCCATGCAAT CGATCCTGCT GCGCCCCGGC GAAACCAGGC AGTTCGCGAT CATGGTGGAG
CCTGATCAGG TCTTTCTCGC ACCACTGCTC AACTGA
|
|---|
| Protein sequence | MLRIMLMVFG LLASGALAAD PLPRGVEHMP ADAASDAPAR LIFSRDSNAP NACDVELYVN
QQVVATLGPG ERTSLDLPSG ELSLAVALSP SGYCGGRGPD AMQSILLRPG ETRQFAIMVE
PDQVFLAPLL N
|
|---|
| |