Gene Pmen_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2716 
Symbol 
ID5107867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2979064 
End bp2979717 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID640503960 
ProductN-(5'-phosphoribosyl)anthranilate isomerase 
Protein accessionYP_001188203 
Protein GI146307738 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0539711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGGG GCGTGAACGT GACAGTCGTG CGCAGCAAGA TTTGCGGCAT CACTCGTATC 
GAGGATGCTC TGGCAGCGGT GGAGGCGGGG GCGGATGCCA TCGGCCTGGT GTTCTACGCG
AAAAGTCCGC GAGCGATCAG CGTCGAGCAG GCGCTGGCGA TCATCCAGGC ATTACCGCCC
TTCGTGACTA CGGTGGGTCT GTTCGTCGAC ATGCCGCGCG CCGAGCTGCA GCAGCTGTTG
CAGCGGGTGC CGCTGGACCT GTTGCAGTTT CATGGTGACG AGTCGCCGGC AGACTGTGAG
GGTCACGGTC GTCCCTACAT CAAGGCCTTG CGGGTGCGCC CTGGCGAGGA CGTCGCGGCG
TCGATGGCGC CCTATGTCGG TGCGCGAGGG ATTCTTCTCG ATACCTTTGT CGAAGGGATT
CCGGGTGGCA CCGGGGCGGT GTTCGACTGG TCGCTGGTGC CGCAGCGGGC GGGTAAGCCG
ATCATCCTCG CCGGCGGCCT GGATGCCGGC AACGTCGCAG CTGCCATTGA CCAGGTCCGA
CCTTATGCGG TGGACGTGAG CGGTGGCGTC GAGCTCAGCA AGGGCATAAA GGATGCAGAG
AAGATTCGCG CGTTCGTGCG GGCGGTGCGT AGCGCCGGAT GTGACGACGC CTGA
 
Protein sequence
MARGVNVTVV RSKICGITRI EDALAAVEAG ADAIGLVFYA KSPRAISVEQ ALAIIQALPP 
FVTTVGLFVD MPRAELQQLL QRVPLDLLQF HGDESPADCE GHGRPYIKAL RVRPGEDVAA
SMAPYVGARG ILLDTFVEGI PGGTGAVFDW SLVPQRAGKP IILAGGLDAG NVAAAIDQVR
PYAVDVSGGV ELSKGIKDAE KIRAFVRAVR SAGCDDA