Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2713 |
Symbol | |
ID | 5107864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2976159 |
End bp | 2976773 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503957 |
Product | sporulation domain-containing protein |
Protein accession | YP_001188200 |
Protein GI | 146307735 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.658125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.104013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGC TGGACAAGGG ACTCAAGCAG CGCATGGTCG GTGCTTTGGT GCTGGTGGCG CTGGCAGTGA TTTTCCTGCC GATGCTGCTG TCGCGCGAGG ACGAGATGCG TCGTGTGGTT GTCGATGCGC CGCCCATGCC GCAGGCCCCG GCCGCTGCGC AGATAGTGGT GCAGCCGGCA GAGGTCGTCG AGCCCGAAGA GCTGCCCGAG GAGCCGCTGC CAGTCGAGGA AGAGGCTCCG CAGCTGGTGG AGATTCCCGA GCCGACCAAG GTGCAGCCGC CACCTGTCGC GGCGCCCAAG CCTGAGCCGG CCAAGGTCGA GCAGGCTGTC ACCAGTGCGC CGGCCAAACC CGAAAGTCGC CTTGACCCCA ACAGCCTGCC GATCAGTTGG TCGGTGCAGC TGGCCAGCCT GTCCAGTCGT GGCGGTGCTG AGAATCTGCA AAAAACGCTG CGTAGTCAGG GCTACAACGC CTATATCCGC ACGTTCGATG GCATGAACCG GGTATTCGTC GGGCCGCTGA TCGAGCGTGC CGAGGCCGAG CGGCTGCGCG ATCAGCTCAA TCGCCAGCAC AAGCTCAACG GTTTCGTCGT GCGCTTCCAG CCCGAGGCCG GTTAA
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Protein sequence | MALLDKGLKQ RMVGALVLVA LAVIFLPMLL SREDEMRRVV VDAPPMPQAP AAAQIVVQPA EVVEPEELPE EPLPVEEEAP QLVEIPEPTK VQPPPVAAPK PEPAKVEQAV TSAPAKPESR LDPNSLPISW SVQLASLSSR GGAENLQKTL RSQGYNAYIR TFDGMNRVFV GPLIERAEAE RLRDQLNRQH KLNGFVVRFQ PEAG
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