Gene Pmen_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2713 
Symbol 
ID5107864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2976159 
End bp2976773 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content65% 
IMG OID640503957 
Productsporulation domain-containing protein 
Protein accessionYP_001188200 
Protein GI146307735 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.658125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.104013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGC TGGACAAGGG ACTCAAGCAG CGCATGGTCG GTGCTTTGGT GCTGGTGGCG 
CTGGCAGTGA TTTTCCTGCC GATGCTGCTG TCGCGCGAGG ACGAGATGCG TCGTGTGGTT
GTCGATGCGC CGCCCATGCC GCAGGCCCCG GCCGCTGCGC AGATAGTGGT GCAGCCGGCA
GAGGTCGTCG AGCCCGAAGA GCTGCCCGAG GAGCCGCTGC CAGTCGAGGA AGAGGCTCCG
CAGCTGGTGG AGATTCCCGA GCCGACCAAG GTGCAGCCGC CACCTGTCGC GGCGCCCAAG
CCTGAGCCGG CCAAGGTCGA GCAGGCTGTC ACCAGTGCGC CGGCCAAACC CGAAAGTCGC
CTTGACCCCA ACAGCCTGCC GATCAGTTGG TCGGTGCAGC TGGCCAGCCT GTCCAGTCGT
GGCGGTGCTG AGAATCTGCA AAAAACGCTG CGTAGTCAGG GCTACAACGC CTATATCCGC
ACGTTCGATG GCATGAACCG GGTATTCGTC GGGCCGCTGA TCGAGCGTGC CGAGGCCGAG
CGGCTGCGCG ATCAGCTCAA TCGCCAGCAC AAGCTCAACG GTTTCGTCGT GCGCTTCCAG
CCCGAGGCCG GTTAA
 
Protein sequence
MALLDKGLKQ RMVGALVLVA LAVIFLPMLL SREDEMRRVV VDAPPMPQAP AAAQIVVQPA 
EVVEPEELPE EPLPVEEEAP QLVEIPEPTK VQPPPVAAPK PEPAKVEQAV TSAPAKPESR
LDPNSLPISW SVQLASLSSR GGAENLQKTL RSQGYNAYIR TFDGMNRVFV GPLIERAEAE
RLRDQLNRQH KLNGFVVRFQ PEAG