Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2711 |
Symbol | |
ID | 5107862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2973691 |
End bp | 2975199 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640503955 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_001188198 |
Protein GI | 146307733 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.966551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.266296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGCA TCGTCGGTAT CGTCGGCAAG TCGAACGTCA ATCAGGCGCT GTATGACGCG CTCACCGTCC TTCAGCATCG CGGCCAGGAC GCTGCCGGCA TCGTCACCAG CCATGACGGC CGGCTATTCC TGCGCAAGGA CAACGGCCTG GTGCGCGATG TGTTCCAGCA GCGCCACATG CAGCGCCTGG TGGGCAACAT GGGCATCGGT CACGTGCGCT ATCCCACCGC TGGCAGCTCC AGCTCGGCCG AAGCCCAGCC GTTTTACGTC AACTCGCCGT ACGGCATCAC CTTGGCGCAC AACGGCAACC TGACCAACGT CGAGCGCCTG GCCAAGGAAA TCTACGAGTC CGACCTGCGT CACGTGAACA CCAACTCCGA CTCGGAGGTG CTGCTCAACG TGTTCGCCCA CGAGCTGGCC CAGCGCGGCA AGCTGCAGCC CACCGAGGAA GACGTGTTCG CCGCGGTCGC CCATGTGCAC GAACGCTGCC TGGGCGGTTA TGCGGTGGTG GCGATGATCA CCGGTTACGG TATCGTCGGC TTCCGCGATC CCAACGGCAT TCGCCCGATC GTCTTCGGTC AGCGCCACAC CGACGAAGGC GTGGAGTACA TGATCGCTTC GGAGAGCGTG TCGCTGGACG TGCTCGGCTT CACCCTGATC CGCGACCTGG CGCCGGGTGA GGCGGTTTAC ATCACCGAGG AAGGCAAGCT GTTCACCCGT CAGTGCGCAC AGAACCCCAA GTACGCGCCG TGCATCTTCG AGCATGTCTA CCTGGCGCGT CCGGACTCGA TCATGGACGG TATCTCGGTG TACAAGGCGC GCCTGCGCAT GGGCGAGAAG CTGGCCGACA AGATCCAGCG CGAGCGTCCG GATCACGACA TCGACGTGGT CATCCCGATT CCCGATACCA GCCGTACCGC CGCGCTGGAG CTGGCCAACC GCCTGGGCGT GAAGTTCCGC GAAGGCTTCG TCAAGAACCG CTACATCGGT CGTACCTTCA TCATGCCCGG CCAGGCGGCG CGCAAGAAAT CCGTACGGCA GAAGCTCAAC GCCATCGAGC TGGAGTTCCG TGGCAAGAAC GTGATGCTGG TGGACGACTC CATCGTGCGC GGCACCACCT GCAAGCAGAT CATCCAGATG GCTCGCGAAG CCGGGGCGAA GAACGTCTAC TTCTGCTCCG CGGCACCGGC GGTGCGCTAC CCCAACGTCT ACGGCATCGA CATGCCCAGC GCCCACGAGC TGATCGCCCA TGGCCGCAGC ACCGAGGAAG TCTGCGAACT GATCGGTGCC GACTGGCTGG TGTACCAGGA TCTGCCGGAT CTGATCGAGG CGGTCAGTGG CAGCAAGAAG ATCAAGATCG ACAACTTCGA CTGCGCGGTA TTCGACGGCA AATACGTCAC CGGAGACGTC GACGAGGCCT ATCTGGACAA GATCGAGCAG GCGCGCAATG ACGCCAGCAA GGCCAAGTCG CAGGCGGTCA GCGCGATCAT CGATCTGTAC AACAATTGA
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Protein sequence | MCGIVGIVGK SNVNQALYDA LTVLQHRGQD AAGIVTSHDG RLFLRKDNGL VRDVFQQRHM QRLVGNMGIG HVRYPTAGSS SSAEAQPFYV NSPYGITLAH NGNLTNVERL AKEIYESDLR HVNTNSDSEV LLNVFAHELA QRGKLQPTEE DVFAAVAHVH ERCLGGYAVV AMITGYGIVG FRDPNGIRPI VFGQRHTDEG VEYMIASESV SLDVLGFTLI RDLAPGEAVY ITEEGKLFTR QCAQNPKYAP CIFEHVYLAR PDSIMDGISV YKARLRMGEK LADKIQRERP DHDIDVVIPI PDTSRTAALE LANRLGVKFR EGFVKNRYIG RTFIMPGQAA RKKSVRQKLN AIELEFRGKN VMLVDDSIVR GTTCKQIIQM AREAGAKNVY FCSAAPAVRY PNVYGIDMPS AHELIAHGRS TEEVCELIGA DWLVYQDLPD LIEAVSGSKK IKIDNFDCAV FDGKYVTGDV DEAYLDKIEQ ARNDASKAKS QAVSAIIDLY NN
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