| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2709 |
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| Symbol | |
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| ID | 5107860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2971561 |
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| End bp | 2972337 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503953 |
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| Product | oxidoreductase |
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| Protein accession | YP_001188196 |
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| Protein GI | 146307731 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.370968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAGT GGGGTAACGA TAGTGCGCCC AACAACGGGC GTGTCGCACT GGTCACCGGT
GCCGCACGCG GGATCGGTCT GGGTATCAGC GCCTGGCTGA TCACCGAAGG CTGGCAGGTG
GTGCTGGCCG ATATCGATCG CGAGCGTGGC TCGAAAGTGG CGCGTGCGCT GGGTGACAAC
GCCTGGTTCG TGGCCATGGA TGTGGCCAAG GAGGACCAGG TGAGCGTCGG TGTCGCCGAG
GTGCTCGGTC AGTTCGGCCG CCTCGATGCG CTGGTATGCA ATGCCGGCAT TGCCGATCCG
CACACACCGC CGCTGGAGTC GCTCGATCTC AAGCGCTGGA ATCGCCTGCT GGCGGTCAAC
CTTACTGGCG CCATGCTGCT GGCCAAGCAC TGCGCGCCGT ACCTGCGCGG TCATCGTGGG
GCCATCGTCA ATATTGCCTC GACCCGCGCC AGTCAGTCCG AGGCCAATTG CGAGGCCTAC
GCCGCGAGCA AGGGCGGGCT GGTTGCGCTC ACTCATGCGC TGGCGGTCAG TCTCGGGCCG
GAGGTGCGCG TGAACTGCGT CAGTCCGGGC TGGATCGATG CTCGCGATCC TGTGCAGCAG
CGTCTGGAGC CGCTATCGGT GTTCGATCAT GCGCAGCATC CGGTCGGCCG CGTCGGTACG
GTGGAAGATG TGGCGGCTCA GGTCGCCTGG CTGCTGTCCG ATGCGGCGGG TTTCGTCACC
GGCCAGGAGT TCGTCATCGA TGGCGGCATG AGCCGCAAGA TGATCTATCA GGATTGA
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| Protein sequence | MLEWGNDSAP NNGRVALVTG AARGIGLGIS AWLITEGWQV VLADIDRERG SKVARALGDN
AWFVAMDVAK EDQVSVGVAE VLGQFGRLDA LVCNAGIADP HTPPLESLDL KRWNRLLAVN
LTGAMLLAKH CAPYLRGHRG AIVNIASTRA SQSEANCEAY AASKGGLVAL THALAVSLGP
EVRVNCVSPG WIDARDPVQQ RLEPLSVFDH AQHPVGRVGT VEDVAAQVAW LLSDAAGFVT
GQEFVIDGGM SRKMIYQD
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