| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2700 |
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| Symbol | |
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| ID | 5107851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2961204 |
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| End bp | 2962904 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503944 |
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| Product | von Willebrand factor, type A |
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| Protein accession | YP_001188187 |
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| Protein GI | 146307722 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.557808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.158328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTT ATTCCCTGCT GCTCGTTCGC CCGCTCGCCG TTGGATTCTC GGCCGGTGCC
CTGCTGGCAC TGGCTGCCTG CAGCGCCTCG GCACCGGAGG CCGAGAAAGC GGCCAGTTCC
GTGCCGCCGC AGCCCATTCT GGCGGATGAG CTGGTCGCCG CCGCACCCGC CGAACTGACC
CGCAAGCGTG CGGCGCCGCT GGCCGGTCAG CTGGCCCCCA TGCCCAGTTC TGTGGCCGAT
GCTGCGCTGC CCGGCTATCG CGACGTGCCG CGCGAGCAGT ATCAAAACTA CCCCGACAAT
CCGGTCTTCG CCGTCAGCGA GACGCCGGTG TCCACCTTCA GCATCGATGT CGACACCGGC
AGCTACGCCA ACGTGAGGCG CTTTCTCAAT GGCGGCCAGC TGCCGCCGAA GGACGCGGTG
CGTCTGGAGG AGCTGGTCAA CTACTTCCCC TATGCCTATC CCTTGCCGCA GGGCGATGCG
CCCTTCGGCG TCAGCACCGA ACTGGCGGTG ACGCCGTGGA ACCCTCAGAC CCGCCTGCTG
CGCATCGCCA TCAAGGCGTC GGACCGCAGT GTCGAGGAGC TGCCGCCGGC CAACCTAGTG
TTTCTGGTGG ATGTCTCCGG CTCGATGCAC CGCCGCGAAG GCCTGCCGAT GGTGCAGGGC
ACCCTGAAGC TGCTGGTCGA CCAGTTGCGT CCGCAGGACC GCGTATCGCT GGTTACCTAC
GCCGGCGCCA CTCAGGTGGT GCTGGACTCC ACGCCCGGCA GCGACAAGGC GAAGATCCGT
GCGGCCATCG ATCAACTGAC GGCAGGCGGC TCCACTGCCG GTGAGTCGGG CATCCAGCTG
GCCTATCAGC AGGCGAGCAA GCACCTGATC GAGGGCGGCA TCAATCGCAT CCTGCTGGCC
ACCGATGGTG ACTTCAACGT CGGCATCAGC GACTTCGACA GCCTCAAGCA ACTGGCTGCG
GACAAGCGCA AGACGGGCGT TTCCCTCACC ACCCTGGGCT TCGGCGTGGA CAACTACAAC
GAGCGCCTGA TGGAGCAGTT GGCCGATGCC GGCAACGGCA ACTACGCCTA CATCGACAAC
CTGCGCGAGG CGCGCAAGGT GCTGGTGGAT CAGCTCGCGT CGACCCTCGC CACCGTGGCC
AGCGACGTGA AGCTGCAACT GGAGTTCAAC CCGAGCGAGG TCAGCGAGTA CCGCTTGCTG
GGCTACGAGA ACCGCGCACT CAAGCGCGAG GATTTCAGCA ACGACAAGGT CGATGCCGGC
GAGATCGGCG CTGGGCACAC CGTCACCGCG CTGTACGAGG TCGTCCCGGC CGGAGGCAAG
GGCTGGCTGG AGCCATTGCG CTATCAGAGC AGCGCTCAGC CAGCGGGCAA GAGCGGCGAG
CTGGCCTGGC TGCGGATTCG CTACAAGGCG CCGGGGGAAG CGAGCAGTCG CCTGCTGGAA
CGACCCATTG CGCGCAACGA GGCGAAACCG GTTGCGGCCG CCAGCGAGGA TCTGCGTTTC
GCCGCTGCGG TGGCAGCCTT CGCCCAGCAG CTCAAGGATG GCCACTACAC CGGCGACTTC
GACCTGGCGC AGAGCATCGC GCTGGCCCGC TCGGGCAAGG GCGAGGACCG CTTCGGCCTG
CGCGGCGAGT TCATCCAGCT GGCCGAAATC GCCCAGAGCC TGCACACTTC AGGCTCCACT
CCAGTACGAG TTCAGCAGTG A
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| Protein sequence | MSAYSLLLVR PLAVGFSAGA LLALAACSAS APEAEKAASS VPPQPILADE LVAAAPAELT
RKRAAPLAGQ LAPMPSSVAD AALPGYRDVP REQYQNYPDN PVFAVSETPV STFSIDVDTG
SYANVRRFLN GGQLPPKDAV RLEELVNYFP YAYPLPQGDA PFGVSTELAV TPWNPQTRLL
RIAIKASDRS VEELPPANLV FLVDVSGSMH RREGLPMVQG TLKLLVDQLR PQDRVSLVTY
AGATQVVLDS TPGSDKAKIR AAIDQLTAGG STAGESGIQL AYQQASKHLI EGGINRILLA
TDGDFNVGIS DFDSLKQLAA DKRKTGVSLT TLGFGVDNYN ERLMEQLADA GNGNYAYIDN
LREARKVLVD QLASTLATVA SDVKLQLEFN PSEVSEYRLL GYENRALKRE DFSNDKVDAG
EIGAGHTVTA LYEVVPAGGK GWLEPLRYQS SAQPAGKSGE LAWLRIRYKA PGEASSRLLE
RPIARNEAKP VAAASEDLRF AAAVAAFAQQ LKDGHYTGDF DLAQSIALAR SGKGEDRFGL
RGEFIQLAEI AQSLHTSGST PVRVQQ
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