Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2693 |
Symbol | |
ID | 5107844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2953358 |
End bp | 2954155 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640503937 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001188180 |
Protein GI | 146307715 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.086276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.305741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATC TGCCCTCCTG CGAAACCCTG CTGCTGAACC TCGACGGAGG CGTGCTGCAC GTCACCCTCA ATCGCCCGGA CAGCCGCAAC GCCATGAGCC TGGCCATGGT CGGCGAACTG CGCGCGACCC TGGAGGCCGT GCGCCATGAT CCGAACGTGC GTGCCCTCGT TCTGCGCGGC GCGGGCGGCC ACTTTTGCGC AGGCGGCGAT ATCAAGGATA TGGCCGGCGC CAGAGCCCGC GGCGGCGACG CCTACCGCGA GCTGAACCGC GCCTTCGGTG CGCTGCTGGA AGAGGCCCAG GCCGCACCGC AGGTACTGGT GGCGGTGCTG GAAGGCGCCG TGCTCGGCGG CGGCTTCGGC CTGGCCTGCG TGTCCGACGT GGCCATCGCC GCCAGCGGCG CCAGGTTCGG CCTGCCGGAA ACCACGCTGG GCATCCTCCC GGCGCAGATC GCCCCCTTCG TGGTGCGGCG CATCGGCCTG ACTCAGGCGC GGCGCCTGGC GCTGACCGTC GCCCGCTTCG ACGGCGCCGA GGCCCTGCGC CTGGGTCTGG TGCACTACTG CGAGCACGAT GACGCCGCCC TGCAGCAGCG CCTGGACGAG ACCCTGGAGC AGATTCGCCA GTGTGCGCCG CAGGCCAACG CCCAGACTAA GGCCCTGCTG CTGGCCAGCG AACGCGAGGC CCTCGGCCCG CTGCTCGACC GCGCCGCCGA ACAGTTCGCC GCCGCGGTCA TCGGCGCCGA GGGCGTCGAA GGCACCATGG CCTTCGTGCA GAAGCGCAAG CCGAAGTGGG CGCAGTAG
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Protein sequence | MNDLPSCETL LLNLDGGVLH VTLNRPDSRN AMSLAMVGEL RATLEAVRHD PNVRALVLRG AGGHFCAGGD IKDMAGARAR GGDAYRELNR AFGALLEEAQ AAPQVLVAVL EGAVLGGGFG LACVSDVAIA ASGARFGLPE TTLGILPAQI APFVVRRIGL TQARRLALTV ARFDGAEALR LGLVHYCEHD DAALQQRLDE TLEQIRQCAP QANAQTKALL LASEREALGP LLDRAAEQFA AAVIGAEGVE GTMAFVQKRK PKWAQ
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