Gene Pmen_2693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2693 
Symbol 
ID5107844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2953358 
End bp2954155 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content72% 
IMG OID640503937 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001188180 
Protein GI146307715 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.086276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.305741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC TGCCCTCCTG CGAAACCCTG CTGCTGAACC TCGACGGAGG CGTGCTGCAC 
GTCACCCTCA ATCGCCCGGA CAGCCGCAAC GCCATGAGCC TGGCCATGGT CGGCGAACTG
CGCGCGACCC TGGAGGCCGT GCGCCATGAT CCGAACGTGC GTGCCCTCGT TCTGCGCGGC
GCGGGCGGCC ACTTTTGCGC AGGCGGCGAT ATCAAGGATA TGGCCGGCGC CAGAGCCCGC
GGCGGCGACG CCTACCGCGA GCTGAACCGC GCCTTCGGTG CGCTGCTGGA AGAGGCCCAG
GCCGCACCGC AGGTACTGGT GGCGGTGCTG GAAGGCGCCG TGCTCGGCGG CGGCTTCGGC
CTGGCCTGCG TGTCCGACGT GGCCATCGCC GCCAGCGGCG CCAGGTTCGG CCTGCCGGAA
ACCACGCTGG GCATCCTCCC GGCGCAGATC GCCCCCTTCG TGGTGCGGCG CATCGGCCTG
ACTCAGGCGC GGCGCCTGGC GCTGACCGTC GCCCGCTTCG ACGGCGCCGA GGCCCTGCGC
CTGGGTCTGG TGCACTACTG CGAGCACGAT GACGCCGCCC TGCAGCAGCG CCTGGACGAG
ACCCTGGAGC AGATTCGCCA GTGTGCGCCG CAGGCCAACG CCCAGACTAA GGCCCTGCTG
CTGGCCAGCG AACGCGAGGC CCTCGGCCCG CTGCTCGACC GCGCCGCCGA ACAGTTCGCC
GCCGCGGTCA TCGGCGCCGA GGGCGTCGAA GGCACCATGG CCTTCGTGCA GAAGCGCAAG
CCGAAGTGGG CGCAGTAG
 
Protein sequence
MNDLPSCETL LLNLDGGVLH VTLNRPDSRN AMSLAMVGEL RATLEAVRHD PNVRALVLRG 
AGGHFCAGGD IKDMAGARAR GGDAYRELNR AFGALLEEAQ AAPQVLVAVL EGAVLGGGFG
LACVSDVAIA ASGARFGLPE TTLGILPAQI APFVVRRIGL TQARRLALTV ARFDGAEALR
LGLVHYCEHD DAALQQRLDE TLEQIRQCAP QANAQTKALL LASEREALGP LLDRAAEQFA
AAVIGAEGVE GTMAFVQKRK PKWAQ