Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2690 |
Symbol | |
ID | 5107841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2949584 |
End bp | 2950453 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503934 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001188177 |
Protein GI | 146307712 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.12909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.769713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATATG ACTCTGTGTT CAAACCGGGC CTGTTCGCAG GCCAGACCAT CCTGGTCACC GGCGGTGGCA GCGGCATCGG CCGCTGCGTG GCCCACGAGC TGGCCTATCT GGGTGCCCAT GTGGTGCTGG TTGGGCGCAA GCAGGAAAAA CTGGAGAAAA CCTGCGCCGA AATCATCGAA GACGGCGGCA GCGCCAGCCT GCACGCCTGC GATATCCGCG ACGAAGAGGC GGTGAAGGCC ATGGTCAGCG CGGTGCTCGC GCAGCGCGGA CGCATCCATC ACCTGGTCAA CAACGCCGGC GGCCAGTTTC CCGCGCCACT GATCGGCATC AACCAGAAAG GCTTCGAGAC CGTGGTGCGC ACCAACCTGG TGGGCGGTTT TCTGGTGGCC AAGGAAGTCT TCCTGCAGAG CCTGAGCAAG CACGGCGGGA GCATCGTCAA CATGCTCGCC GACATGTGGG GCGGCATGCC CGGCATGGGC CATTCCGGCG CGGCACGGGC CGGCATGGAG AACTTCACCA AGACCGCCGC CTACGAGTGG GGCCACGCCG GCGTGCGGGT CAACGCCGTG GCGCCGGGCT GGATCGCCTC CAGCGGCATG GACACCTACC CCGAGTCGAT GAAGAACATG ATCCGCAACC TCAAGGATCA CGTGCCGCTG CAACGCATCG GCAGCGAGTC CGAGGTGGCC GCCGCCATCG TCTTCCTGCT CAGCCCCGGC GCCAACTTCA TCAGCGGCAA CACCATCCGC ATCGACGGTG CAGCCAGCCA GGGCACCCGT GCCTGGACCC TGGGCAAGGC GAGAAACAGC GAGCCCTACA ACGGTTTCCC TCGGGCCTAC CTGCCCGATG TACTGAAAGA TCAGGAGTAA
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Protein sequence | MPYDSVFKPG LFAGQTILVT GGGSGIGRCV AHELAYLGAH VVLVGRKQEK LEKTCAEIIE DGGSASLHAC DIRDEEAVKA MVSAVLAQRG RIHHLVNNAG GQFPAPLIGI NQKGFETVVR TNLVGGFLVA KEVFLQSLSK HGGSIVNMLA DMWGGMPGMG HSGAARAGME NFTKTAAYEW GHAGVRVNAV APGWIASSGM DTYPESMKNM IRNLKDHVPL QRIGSESEVA AAIVFLLSPG ANFISGNTIR IDGAASQGTR AWTLGKARNS EPYNGFPRAY LPDVLKDQE
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