| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2681 |
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| Symbol | |
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| ID | 5107832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2940998 |
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| End bp | 2941735 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640503925 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001188168 |
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| Protein GI | 146307703 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.774339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGCG TTTTTGTCCT GTCCGAGACC CGCCTCATGC CCGCCTGCCA AACCCCGATC
ATCGTCGCCC TCGACTTTCC CAGCCGTGAC GCCGCCCTGG CCCTGGCCGA TCGCCTCGAT
CCGGCGCTGT GCCGGGTCAA GGTTGGCAAG GAGCTGTTCA CCCGCAGCGG CCCGCAGGTG
GTCGAGGCGC TGCAGGCCAA GGGCTTCGAG CTGTTTCTCG ATCTGAAATT CCACGACATC
CCCAACACCA CGGCCATGGC GGTCAAGGCT GCGGCCGAAC TGGGCGTATG GATGGTCAAC
GTGCACTGCT CCGGCGGCCT GCGCATGATG GCGGCCTGCC GCAACGAGCT GGACAAGCTG
ACTGGCGCCA AGCCGCTGCT GATCGGCGTG ACCGTGCTGA CCAGCATGGA GCAGCAGGAC
CTGGCCGGCA TCGGCCTGGA CGTACCGCCG CAGGAGCAGG TACTGCGCCT GGCCGGCCTG
GCAGCCGATG CCGGGCTCGA TGGTCTGGTC TGCTCGGCGC AGGAGGCGCA GGCGCTGAAG
GTCGCGCAGC CGCGTCTGCA GCTGGTGACG CCGGGCATTC GTCCTGCCGG CAGCAATGCC
GATGACCAGA AACGCATCCT TACCCCGCGT CAGGCGCTGG AGGCCGGCTC CGACTATCTG
GTGATCGGTC GCCCGATCAG CCAGGCCGCC GACCCGGCGC AGGCGCTGGC TGCGGTGGTC
GCCGAGCTGC GCGCCTGA
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| Protein sequence | MRGVFVLSET RLMPACQTPI IVALDFPSRD AALALADRLD PALCRVKVGK ELFTRSGPQV
VEALQAKGFE LFLDLKFHDI PNTTAMAVKA AAELGVWMVN VHCSGGLRMM AACRNELDKL
TGAKPLLIGV TVLTSMEQQD LAGIGLDVPP QEQVLRLAGL AADAGLDGLV CSAQEAQALK
VAQPRLQLVT PGIRPAGSNA DDQKRILTPR QALEAGSDYL VIGRPISQAA DPAQALAAVV
AELRA
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