| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2678 |
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| Symbol | |
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| ID | 5107829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2937732 |
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| End bp | 2938922 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503922 |
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| Product | benzoate transporter |
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| Protein accession | YP_001188165 |
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| Protein GI | 146307700 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
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| TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.950649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACG TCGCCCCTAC CCGCCTGCGC CCACTGGCCG ATACCTCCAC CTCGGCCGTG
GTCGCTGGCT TCATCGCCAT GCTCACCGGC TACACCAGCT CCCTGGTGCT GATGTTCCAG
GCCGGCCAGG CTGCCGGCCT CAGCGCCGGG CAGATTTCCT CGTGGATCTG GGCACTGTCG
ATCGGCATGG CGCTGTGCTG CATCGTGCTC TCGCTGCGCT ACCGCGCGCC GGTGATGATC
GCCTGGTCGA CGCCTGGTGC GGCGCTGCTG ATCACCAGCC TGCCGCAGGT CTCTTATGGC
GAGGCGATTG GCGCCTACAT CCTGGCCTCG GGCCTGATCG TGCTGATCGG CCTGACCGGT
ACGTTCGACC GCCTGATGCG CCGCATACCC GCCTCCATCG CCGCTGCGCT GCTGGCTGGT
GTGCTGTTCA AGATCGGTCT GGAAATCTGC GTGGCCGCCG AGCAGCAGCC CTTCCTGGTG
ATCGCCATGC TGCTGGCCTA TCTGCTCGGC AAACGTCTAT GGCCGCGCTA CTCGGTGCTG
TCCGCGCTGA TCGTCGGCAG CGTACTGGCC GGGGTCTTCG GCTTGCTGGA CTTCAGCGAT
TTCCAGCTGC AGCTGGCCAC GCCCGAGTGG ACCACGCCCA GCTTCTCGCT GGCCGCGGCG
ATCAGCATCG GCATTCCGCT GTTCATCGTC GCCATGGCCT CGCAGAACCT GCCCGGCATG
GCCGTGCTGC GCGCCAACGG CTATGACGTG CCGGCCTCAC CGCTGCTGAC CAGCACCGGC
CTGGTATCGA TTCTGATGGC GCCGTTCGGC AGCCACGGCA TACACATGGC CGCCATCAGC
GCCGCCATCT GCGCCGGCCC GGAAGCCCAT GAAGACCCGC GCAAGCGCTA CACAGCGGCG
GTCTGGTGCG GGGTGTTCTA CGCCATCGCC GGCATCTTCG GCGCCACCCT GGCCTCGCTG
TTCGCCGCGT TGCCGGCCGC ACTGATCCTC TCCATCGCCG CGCTGGCGCT GTTCGCCTCG
ATCATCGGCG GCCTGACCCA GGCCATGAGC GAGCCCAACG AGCGCGAAGC GGCGCTGATC
ACCTTTTTGG TGACGGCGTC GGGGATGACC CTGGCCGGCG TCGGCTCGGC CTTCTGGGGC
ATAGTCGCCG GCCTGTTGAC CCTGGCCGTG CTGAACTGGG GCAAGCGGTA G
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| Protein sequence | MQDVAPTRLR PLADTSTSAV VAGFIAMLTG YTSSLVLMFQ AGQAAGLSAG QISSWIWALS
IGMALCCIVL SLRYRAPVMI AWSTPGAALL ITSLPQVSYG EAIGAYILAS GLIVLIGLTG
TFDRLMRRIP ASIAAALLAG VLFKIGLEIC VAAEQQPFLV IAMLLAYLLG KRLWPRYSVL
SALIVGSVLA GVFGLLDFSD FQLQLATPEW TTPSFSLAAA ISIGIPLFIV AMASQNLPGM
AVLRANGYDV PASPLLTSTG LVSILMAPFG SHGIHMAAIS AAICAGPEAH EDPRKRYTAA
VWCGVFYAIA GIFGATLASL FAALPAALIL SIAALALFAS IIGGLTQAMS EPNEREAALI
TFLVTASGMT LAGVGSAFWG IVAGLLTLAV LNWGKR
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