| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2673 |
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| Symbol | |
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| ID | 5107824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2932147 |
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| End bp | 2932671 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503917 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001188160 |
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| Protein GI | 146307695 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.451299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGTGT CGGTTCAGGA TTCCAGCAAT CAGCAGTTGG TCGGCCTGCT TTACCGCGAC
CATCGCGACT GGCTGTTCGG CTGGCTGCGC AAAAGTCTGA ACTGCACGCA GCGCGCCGAA
GACCTGAGTC AGGACACCTT CGTGCGCCTG CTCGGCCGCC CGGACCTGCA CAGCCCGCGT
GAACCTCGTG CCTTGCTCAC CACCATCGCC AGGGGCCTGC TGATCGACCA GTTCCGCCGC
AGTGCGCTGG AGCGCGCCTA TCTCGAAGAA CTCGCTCTGG CCCCCGAGGC CCTGCAACCG
AGCCCCGAGG AACAGGCGCT GGCGCTGGAA CAGCTGAGCG AGATCGATCG TCTGCTCGGA
CACCTGTCGA GCAAGGCGCG CGCCGCCTTC CTCTACAACC GCCTGGACGG TCTCGGCCAT
GCCGAGATCG CCGAGCGTCT GGGCGTATCG CCCTCGCGGG TGCGCCAGTA CCTCGCCCAG
GGCCTGCGCC AGTGCTACAT CGCGCTGTAT GGAGCGCCGC AATGA
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| Protein sequence | MRVSVQDSSN QQLVGLLYRD HRDWLFGWLR KSLNCTQRAE DLSQDTFVRL LGRPDLHSPR
EPRALLTTIA RGLLIDQFRR SALERAYLEE LALAPEALQP SPEEQALALE QLSEIDRLLG
HLSSKARAAF LYNRLDGLGH AEIAERLGVS PSRVRQYLAQ GLRQCYIALY GAPQ
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