Gene Pmen_2672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2672 
Symbol 
ID5107823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2931520 
End bp2931957 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content65% 
IMG OID640503916 
ProductMarR family transcriptional regulator 
Protein accessionYP_001188159 
Protein GI146307694 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.273141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.798793 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC CCGCCGTGCA GCAGGCGGCC ATGGAGGCCT TCTTCTTCGG CTACCAGGCC 
TTCACCGCCA AGCCCGACGA GATGCTGGCC AGGCGCGGCC TGTCACGGGT GCACCACCGC
ATCCTGTTCT TCATCGCCAA GTATCCCGGG CTGAGCATGA AGGAGCTGCT GGGCTACCTG
GGCGTGAGCA AGCAGGCGCT GAACACGCCA CTGCGCCAGC TGATGGAAAT GCACCTGGTG
CAGAGCGAGG CGGCAGAAGA CGACAAGCGC AAACGCCTGC TCGGCTTCAC CGCCGAAGGC
GCCAAGCTGG AACAGGCCCT GCGTCGCGAG CAGGCGCGAC TGCTGCAACG GGTGTTCAGC
GAAATGGGAG AAGAAGCCGT ACAGGGCTGG CTGGCCGTCA ATCACGCCCT GGCCCGCAGC
CGCCAGGAAC GTACGTAG
 
Protein sequence
MKNPAVQQAA MEAFFFGYQA FTAKPDEMLA RRGLSRVHHR ILFFIAKYPG LSMKELLGYL 
GVSKQALNTP LRQLMEMHLV QSEAAEDDKR KRLLGFTAEG AKLEQALRRE QARLLQRVFS
EMGEEAVQGW LAVNHALARS RQERT