| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2665 |
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| Symbol | |
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| ID | 5107974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2922726 |
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| End bp | 2924354 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503909 |
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| Product | protein of unknown function DUF894, DitE |
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| Protein accession | YP_001188152 |
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| Protein GI | 146307687 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0627895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCG ATAAACCTTC GCCTTGGGGC GCACTCAGGC ACAGCACCTT CCGCTGGCTG
TGGCTGGCCA GCATCGCCTC GAACATCGGC ACCTGGATGC ACGAGGTGGG TGCCGGCTGG
CTGATGACCA GCCTGTCGGC CAACCCCATG CACGTGGCGC TGGTACAGGT CGCCGGCTCG
GCGCCGATGT TCCTCCTGGC GCTGCCGGCC GGCGCCATGG CCGATATCGT CGACAAGCGC
CGCTATCTGC TCGGCGTGCA GCTGTGGATG GCGGCGGTGG CGACGCTGCT GGCCGTACTG
ACCCTGCTCG GCCTGACCAC GGTCTGGCTG CTGCTGGGCA TGACCCTGGC CATGGGCGTC
GGCACCGCGT TGATGATGCC GGCCTGGTCG GCGCTGACGC CGGAGCTGGT GAGCAAGCGC
GACCTGCCCT CGGCCATCGC CCTGTCCAGC CTCGGCATCA ACGTCGCCCG TGCCCTCGGC
CCGGCCATCG CCGGGGTACT GGTCAGCTTG AGCGGCCCCT GGGCGACCTT CGCCCTCAAC
GCCCTGTCGT TCTTCGCGGT GATGGCGGTG CTGCTGACCT GGAAGCGCGA GCGCCAGGTG
GCGGCCTTCC CGGCCGAGCG CCTGCTGGGC GCCATGCGCG CCGGCTGGCG CTATAGCCGC
GCCTCGAAAC CGCTGCAATC GGTGCTGGTA CGCGCCGCGG CCTTCTTCGT CGGCGCCAGC
GCCGGCATGT CGCTGCTGCC GCTGATCGTG CGCGGCGAGT TGCAGGGCAG CGCCAGCGAC
TTCGGCCTGA TGCTGGGCAG CGTCGGCGTC GGCGCGGTGC TCGGCGCCAC CTTGCTGCCG
CGCATTCGCG AGCGCATCAG CAGCGACCGT CTGGTGCTGC TGGCCAGCCT GCTCTACGCC
CTGGTGCTGC TGGCCCTGGC CAGCCTGCGC CAGTTCGCCG CCCTGCTGCC GGTGATGCTG
CTCAGCGGCG CGGCGTGGAT CGCCGTGCTG TCCAGCCTGC AGGTCGCCGC GCAGACCTCG
GTGCCGGACT GGGTAAGGGC GCGCGCCCTT TCCATCTATA TCCTGGTGTT CTTCGGCAGC
ATGGCCGCCG GCGGCGCGCT GTGGGGCTTC GTCGCCAGCC AGGCGTCGAT CCCCCTCGCC
CTGTTCGCCG CGGCCGGCTG TCTGGCGCTG GGCGGGCTGC TGACGTCGCG CTTTCCGCTG
CCGGTTACCG AAGCCGAGGA TCTCGCCCCG TCGCTGCACT GGCCGGCGCC GATCCTGGCC
GACGAAGCCG ACCTCGAGCG CGGTCCGGTG ATGGTCACGC TGCACTACGA CATCGCGCCG
GAGCATGCCT CGGCCTTCCG CCAGGCAATG AGCGAGGTGG CGCGCATGCG CAGACGCAAC
GGTGCGTTCT CCTGGGGTCT GGTGCAGAGC AGCGAGAACC CGCGCCACTG GCAGGAGTTC
TTCTTCGACG AGTCCTGGCT CGAACACCTG CGCCACCACG GCCGGGTGAC CCGCGCCGAG
CAACGCATCG AGGCGGCAGC CAGGCAGTTC CAGAGCGCCG GGGTCGCGAT ACGCATCGAC
CACTTCCTGA TGCCGGGCAA GCAGGCGCCA GAGCATTCGG ACATTCAGCA TGCCCACGGT
CAGCCATGA
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| Protein sequence | MASDKPSPWG ALRHSTFRWL WLASIASNIG TWMHEVGAGW LMTSLSANPM HVALVQVAGS
APMFLLALPA GAMADIVDKR RYLLGVQLWM AAVATLLAVL TLLGLTTVWL LLGMTLAMGV
GTALMMPAWS ALTPELVSKR DLPSAIALSS LGINVARALG PAIAGVLVSL SGPWATFALN
ALSFFAVMAV LLTWKRERQV AAFPAERLLG AMRAGWRYSR ASKPLQSVLV RAAAFFVGAS
AGMSLLPLIV RGELQGSASD FGLMLGSVGV GAVLGATLLP RIRERISSDR LVLLASLLYA
LVLLALASLR QFAALLPVML LSGAAWIAVL SSLQVAAQTS VPDWVRARAL SIYILVFFGS
MAAGGALWGF VASQASIPLA LFAAAGCLAL GGLLTSRFPL PVTEAEDLAP SLHWPAPILA
DEADLERGPV MVTLHYDIAP EHASAFRQAM SEVARMRRRN GAFSWGLVQS SENPRHWQEF
FFDESWLEHL RHHGRVTRAE QRIEAAARQF QSAGVAIRID HFLMPGKQAP EHSDIQHAHG
QP
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