| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2652 |
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| Symbol | |
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| ID | 5107961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2908593 |
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| End bp | 2909825 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503896 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001188139 |
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| Protein GI | 146307674 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.52998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCAGC TGATCGTCTG TCTTACCTGC CTCCTCTGCC TCAGTGGCTG CTCGAGCCTG
CAGCCACAGG AGGGCCTGAT CGCCCGGTCG AGCGAACTGC TGAGCAAGGC CGGCGAACGG
ATCAGCCAGC AGGCGCGCAA CCTGGGCAAC CAGGGCTCTG CGCAAAACAC TGCGCAGTAT
GATCGGGAGC TGGCGGCGCT GTTCGACCAG CCCTACATCG CCCCCCTGAC TCACTACCTC
GATCAGCATG GCAGCGACCC AAGCCGCAGC GCCCATCTGC GTCAGGTCGT CGAGGAGCGC
CAGCGCCGGT GCCGGCAGGT TGCCCTGCGC TACGCCGAAC GCGACAAGAC CAACGAGAAT
CTGCAGCAGA TGCGCGCCAG CTATGCCGAT TCCTGTCCGG CGGAGATTGC CGCCTTTGCC
GCTCAGATCA AACCCGTGGC GACGAGCGAG CGCCCCACCC CAAGCCAGGC AACGCCCACC
GGCAAAGGGT CGCCCAGAAC GACCAGCGCA GGCACCGAAC AGGCCAACGA GTGCTATCTG
CTATTCACCA TCAAGAACTA CAGCCAGGCT CGTGACGCCT GCCTGGCGCC GGCCGAGGCA
GGCGATGGCA AGGCCCAGTA CAACCTGTCG GTGATCGCCA GCAGCCTGAA GAAATACGCC
GAGGCCCTGC ACTGGGCGCG CCGCGCTGCC GAACAGTCGC CCGACGGGCG TTACCAGCTG
GGCCAGCTGT ACCTGCGCGG TCAGGGCGTC GAGCAGAACC CCGCCACCGC CCTGAGCTGG
TTCGACCAGG CGGCCGACCA GGGCCTGGCC CGCGCCCAGT ATCAGAGTGC GCGCATGTAT
CAGCGCGGCC AGGGCGTCGC GGCCAACCCC ATCAAGGCGC GCCAGCGTTT CGAACAGGCC
GCCAAACAGG GACATCGCGA GGCGCAGCTC GAGCTCGGCC TGATCTACCT CGAGGGCAAG
GGCGTCGCGG CGAGCAACGA CAAGGCGCAC GACTGGCTGC TGCGCGCCGC GCGCCAGGGC
AGCGCGGCCG CACAGTACCA GCTCGGCGAA CTGTACGCCG AGGGCCGCGG GGTAGCGGCC
AATGCCGCAG CGGCTTACGT CTGGATCAGC CTGGCCCGCG ACAATGGCGA GCCGCGCGCC
GAAGCCCGCC TGCAGCAATT GCGCACGCAA CTCGACGACG GGCAGATCGC CCAGGCTCAG
GCGCAGGTGC GCCGGGCACT GGATCAGCGT TGA
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| Protein sequence | MRQLIVCLTC LLCLSGCSSL QPQEGLIARS SELLSKAGER ISQQARNLGN QGSAQNTAQY
DRELAALFDQ PYIAPLTHYL DQHGSDPSRS AHLRQVVEER QRRCRQVALR YAERDKTNEN
LQQMRASYAD SCPAEIAAFA AQIKPVATSE RPTPSQATPT GKGSPRTTSA GTEQANECYL
LFTIKNYSQA RDACLAPAEA GDGKAQYNLS VIASSLKKYA EALHWARRAA EQSPDGRYQL
GQLYLRGQGV EQNPATALSW FDQAADQGLA RAQYQSARMY QRGQGVAANP IKARQRFEQA
AKQGHREAQL ELGLIYLEGK GVAASNDKAH DWLLRAARQG SAAAQYQLGE LYAEGRGVAA
NAAAAYVWIS LARDNGEPRA EARLQQLRTQ LDDGQIAQAQ AQVRRALDQR
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