| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2638 |
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| Symbol | |
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| ID | 5107948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2896595 |
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| End bp | 2897542 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503882 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001188126 |
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| Protein GI | 146307661 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCAC CCCTTGCTAC CGCTGCAACC CTCGATACCC CACTCGCTGA ACTCAGCCAC
GAAATGGCCC GCCTGGTTGA GCGCTTCGTG CCTGACGACG GGTTGCACCT CACGGCCATT
CCAGGCCTCA AACTGGCGCG CGCCACCTCG CCAAGCCTGC CGATGCAGAC GGTTTACGAT
CCCTGCCTGT GCATCATCGC GCAGGGTCGC AAGGAGATAC GTCTGGGCGA CGAGCTCTAT
GTCTACGATC CGCTCAATTA CCTCGTGGCG TCGGTGATGC TGCCGGTCAC CGGCCGGGTG
ATCGAAGCCA GTCCGGAGGC GCCGTACCTG AGTCTCGCGC TGGAGATCGA CCCGGCCCTG
ATCAGCAGCC TGCTGACCGA GATGCCGCCC ATCCCGGCGC CTGATGCAGC CTCGCAACGC
GCCCTGTTTC TCGACCGCCT CGATCCGCGC CTGCTGGATG CGGTGATCCG CCTGCTGCGT
CTGCTGGAAA CCCCGCGCGA CATCGCCATG CTGGCGCCAC TGGCCCTGCG CGAGATCTTC
TATCGGATGC TGCTCAGCCC GCAGGGCCAC CGCCTGCATG AAGTGGTGGT CGCCGACAGC
CAGAGCCAGC GCATCTCCAG GGCCATCGAG TGGCTGCGCA AGAACTTCGA CCAGCCGCTG
CGCATCGAAG AACTGGCCCG CGAAGTCAAC CTGAGTCCAT CGACCCTGCA TCACCGCTTC
AAGGCCGTTA CCGCCTTCAG CCCGTTGCAA TATCAGAAGC AACTGCGCCT GCAGGAGGCT
CGCCGGCTGA TGCTGTGCGA TAACCTCGAG GCGGCCGCGG CCAGCTACCG CGTGGGCTAC
GAGAGCCCTT CGCAGTTCAG CCGCGAATAC AGCCGCCTGT TCGGCGCCCC GCCGCAGCGC
GATATCGCCC GCCTACGGCA GGCGGCGCAG AATCAGCAAG CTTCCTGA
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| Protein sequence | MQSPLATAAT LDTPLAELSH EMARLVERFV PDDGLHLTAI PGLKLARATS PSLPMQTVYD
PCLCIIAQGR KEIRLGDELY VYDPLNYLVA SVMLPVTGRV IEASPEAPYL SLALEIDPAL
ISSLLTEMPP IPAPDAASQR ALFLDRLDPR LLDAVIRLLR LLETPRDIAM LAPLALREIF
YRMLLSPQGH RLHEVVVADS QSQRISRAIE WLRKNFDQPL RIEELAREVN LSPSTLHHRF
KAVTAFSPLQ YQKQLRLQEA RRLMLCDNLE AAAASYRVGY ESPSQFSREY SRLFGAPPQR
DIARLRQAAQ NQQAS
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