| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2636 |
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| Symbol | |
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| ID | 5107946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2894398 |
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| End bp | 2895687 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503880 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001188124 |
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| Protein GI | 146307659 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.773353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCC ACGCCAGTGA GCACGTCGAC AGCTACTACG CCCATAGCTG CAAGGAGCGA
CTGACGCCGT ATCCCGCTTT GCAGGAGCAG CTGCAGTGCG ATGTGCTGGT CATTGGTGCC
GGCTTCAGTG GCCTGCATAC CGCCTTGCGC CTGGCCGAGG CTGGGCGGCG GGTGATCGTT
CTGGAAGCCA GCCGGGTGGC CTGGGCCGCG TCTGGGCGTA ACGGCGGGCA GGCGATTCTC
GGCTGGTCCT GCGATATGCC GCCGCTGGAG AAAACGCTCG GCATCGAGCG TGCTCGCCGC
CTCTGGGACG GCATGGCATG GGCTGCGCGG GAACTGCGCG AATTGCCGCA GCGCCATGGC
TTCGATTGCG ATTACCGCCG TGGCCATCTG TGGACGGCGG TGCTGCCAAG GCGGGTGGCG
TTGCTGCATG AATGGCAGGA GGAGGCCGCC TACAAGTGGG GGCACCGCGC GCTGCAGTTC
GTCTCCCGTC AGCAGATGCC GGAGTGGGTC GCCAGCGAGC GCTATCACGC CGGCCTTTAC
GACCCTGAGG CTGGCCATCT CAACCCGCTC AAGCTGGCGC TTGGCCTGGC CGAGGCTTTC
ATGCGCGCCG GTGGGCAGAT CTTCGAACAG AGTCGCGCGC TGAGTCAGGA GGCCCATGGC
GCGGGCTACC GGGTGCGTAC CGAGCAGGGC AGCGTGCAGG CCGACAATCT GGTGCTGGCC
TGCAATACCT ATATCGACGA TCTGGAGCCA CGCCTGGCGC GGCGCATCCT GCCAGTCGGC
ACCTACCAGA TCGCCACCGA ACCGTTGGGC GCCGAGCGGG CCGAGGCATT GCTGCCGCGC
AATGCCTGCG TCACCGACAA CCAGTTCGTG CTCGACTATT TCCGCCGTAC GCCGGATCAC
CGCCTGCTGT TCGGTGGCGG TTGCACCTAT CTGGGCGGCT TGCCGAAGGA CATGGCGGCG
GCGACGCGGC CGTTCCTCGA ACGCGTCTTC CCGCAACTGT CGGGCGTGGC CATCGACTTC
GCCTGGGGCG GGCATATCGA CGTCACCCGT GCGCGTACGC CGGATGTCGG CGGCGAGAAT
GGTCGCTACT GGCTGCAGGG CTTCTCCGGG CATGGCGTGT TGCCCACGCT CGCGGCTGCG
CGGGCGGTCA GTGACGCGAT TCTCGGCAAT GACGATGAAC TGGCGCTGTA CCGGCAACTG
CGCAATCCCG CCTTTCCCTT CGGCGAGCGC CTGGCGGCTC CCCTGGAGGC CATCGGCAAG
GCCTGGTATC GCCTGCGGGA CTACTTCTGA
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| Protein sequence | MFRHASEHVD SYYAHSCKER LTPYPALQEQ LQCDVLVIGA GFSGLHTALR LAEAGRRVIV
LEASRVAWAA SGRNGGQAIL GWSCDMPPLE KTLGIERARR LWDGMAWAAR ELRELPQRHG
FDCDYRRGHL WTAVLPRRVA LLHEWQEEAA YKWGHRALQF VSRQQMPEWV ASERYHAGLY
DPEAGHLNPL KLALGLAEAF MRAGGQIFEQ SRALSQEAHG AGYRVRTEQG SVQADNLVLA
CNTYIDDLEP RLARRILPVG TYQIATEPLG AERAEALLPR NACVTDNQFV LDYFRRTPDH
RLLFGGGCTY LGGLPKDMAA ATRPFLERVF PQLSGVAIDF AWGGHIDVTR ARTPDVGGEN
GRYWLQGFSG HGVLPTLAAA RAVSDAILGN DDELALYRQL RNPAFPFGER LAAPLEAIGK
AWYRLRDYF
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