Gene Pmen_2629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2629 
Symbol 
ID5107939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2888315 
End bp2888797 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID640503873 
ProductMarR family transcriptional regulator 
Protein accessionYP_001188117 
Protein GI146307652 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.8863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG CAACCGCAAA GGCAACCGTC ATGACCACTC AAGTACAGCC CTGTGCCGAG 
CTGATGCTGG ACAACCAGCT GTGCTTCGCC CTCTATTCCA CTTCGCTGCT GATGACCAAG
ACCTACAAGC CGCTGCTGCA AGCGCTGGGG CTGACCTATC CGCAGTATCT GGCCATGCTG
GTGCTGTGGG AGAACGAAGG GATCACTGTC AGCGAAATCA GCGCACGCAT GCTGACCGAC
CCAGGCTCGC TCACCCCCCT GCTCAAGCGC CTGGAAAGCG AAGGTCTGTT GCAGCGCCAG
CGCAGCAGCC AGGACGAACG GGTCGTGCAA CTCCATCTGA CCGACAAGGG CCGCGCCCTT
CACGAACAGG CCAAGGCCAT CCCGGCCTGC ATCCTCAAGG CCACCGGCCA GAGCATGGAG
CAGCTCGGTG AACTGCGCGA TGACCTGATC ACGCTGCGCA AGCACCTGCA GGACGCTCTC
TGA
 
Protein sequence
MPIATAKATV MTTQVQPCAE LMLDNQLCFA LYSTSLLMTK TYKPLLQALG LTYPQYLAML 
VLWENEGITV SEISARMLTD PGSLTPLLKR LESEGLLQRQ RSSQDERVVQ LHLTDKGRAL
HEQAKAIPAC ILKATGQSME QLGELRDDLI TLRKHLQDAL