Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2627 |
Symbol | |
ID | 5107937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2887251 |
End bp | 2887901 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640503871 |
Product | hypothetical protein |
Protein accession | YP_001188115 |
Protein GI | 146307650 |
COG category | [S] Function unknown |
COG ID | [COG3132] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTCG CCCCCTCCCC GCTGGTTGGT GAAACGCCGC TGCATGCCGT CGAGGTACGT ATCCTCGGCT GCCTGATCGA GAAGCAGCTG ACCACGCCGG AAACCTACCC GCTGACCCTC AATGCCGTGC AACTGGCCTG CAACCAGAAG ACCAGCCGCG AACCGCTGAT GCAGCTGGAA ACCGGTGAGG TCGGCCGTTA CCTGCGCAGC CTCGAGGGGC GCAAGCTGGT GCACCTGGTC ATGGGCAGCC GCGCCGACCG CTGGGAACAG CGCTGCGACA AGCAGCTGGA ACTGGTCAAG CCGCAGACGG TGCTACTGGG CCTGTTGATG CTGCGCGGCC CGCAGACCCT CAACGAACTG CTCACGCGCA GCAACCGCAT GCACGACTTC GACGATGTGG ACGAGGTCCA GCATCAGCTG GAACGCCTCA TCGCTCGTGG GTTGGCCGTG TTGCTGCCGC GCCAGAGCGG GCAGCGCGAG GATCGCTACA TGCACCTGCT GGGCGAGCCC GCCGATCTGG AAAGTCTGCT GCTCAGCCGT CCAGCCAGCC GTGGCGACGC CTCGGCACCT AGCGAAGATC GTCTGGTCGA ACTGGAGGCG CGTATCGCTG CCCTGGAAGA ACGCCTGGCC CGCCTCGAAG GCGCGCAATA A
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Protein sequence | MSLAPSPLVG ETPLHAVEVR ILGCLIEKQL TTPETYPLTL NAVQLACNQK TSREPLMQLE TGEVGRYLRS LEGRKLVHLV MGSRADRWEQ RCDKQLELVK PQTVLLGLLM LRGPQTLNEL LTRSNRMHDF DDVDEVQHQL ERLIARGLAV LLPRQSGQRE DRYMHLLGEP ADLESLLLSR PASRGDASAP SEDRLVELEA RIAALEERLA RLEGAQ
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