Gene Pmen_2627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2627 
Symbol 
ID5107937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2887251 
End bp2887901 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID640503871 
Producthypothetical protein 
Protein accessionYP_001188115 
Protein GI146307650 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCG CCCCCTCCCC GCTGGTTGGT GAAACGCCGC TGCATGCCGT CGAGGTACGT 
ATCCTCGGCT GCCTGATCGA GAAGCAGCTG ACCACGCCGG AAACCTACCC GCTGACCCTC
AATGCCGTGC AACTGGCCTG CAACCAGAAG ACCAGCCGCG AACCGCTGAT GCAGCTGGAA
ACCGGTGAGG TCGGCCGTTA CCTGCGCAGC CTCGAGGGGC GCAAGCTGGT GCACCTGGTC
ATGGGCAGCC GCGCCGACCG CTGGGAACAG CGCTGCGACA AGCAGCTGGA ACTGGTCAAG
CCGCAGACGG TGCTACTGGG CCTGTTGATG CTGCGCGGCC CGCAGACCCT CAACGAACTG
CTCACGCGCA GCAACCGCAT GCACGACTTC GACGATGTGG ACGAGGTCCA GCATCAGCTG
GAACGCCTCA TCGCTCGTGG GTTGGCCGTG TTGCTGCCGC GCCAGAGCGG GCAGCGCGAG
GATCGCTACA TGCACCTGCT GGGCGAGCCC GCCGATCTGG AAAGTCTGCT GCTCAGCCGT
CCAGCCAGCC GTGGCGACGC CTCGGCACCT AGCGAAGATC GTCTGGTCGA ACTGGAGGCG
CGTATCGCTG CCCTGGAAGA ACGCCTGGCC CGCCTCGAAG GCGCGCAATA A
 
Protein sequence
MSLAPSPLVG ETPLHAVEVR ILGCLIEKQL TTPETYPLTL NAVQLACNQK TSREPLMQLE 
TGEVGRYLRS LEGRKLVHLV MGSRADRWEQ RCDKQLELVK PQTVLLGLLM LRGPQTLNEL
LTRSNRMHDF DDVDEVQHQL ERLIARGLAV LLPRQSGQRE DRYMHLLGEP ADLESLLLSR
PASRGDASAP SEDRLVELEA RIAALEERLA RLEGAQ