| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2605 |
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| Symbol | |
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| ID | 5107915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2868260 |
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| End bp | 2868868 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503849 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_001188093 |
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| Protein GI | 146307628 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000472747 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.716492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG AAATCATCGA GAAGAATATC GGCCTGATGG CGCTGCTGAT GGTGATCGCC
GTCAGCATCG GCGGCCTGAC CCAGATCGTT CCGCTGTTCT TCCAGGACGT CACCAACGAG
CCGGTGGAAG GCCTCAAGCC CTACACCGCG CTGCAACTGG AAGGCCGCGA CATCTATATC
AAGGAAGGCT GCGTCGGCTG CCACTCGCAG ATGATCCGTC CGTTCCGCGC CGAGACCGAG
CGTTACGGCC ACTACTCCGT CGCCGGCGAA AGCGTCTGGG ATCACCCCTT CCTGTGGGGC
TCCAAGCGTA CCGGTCCGGA CCTGGCCCGC GTCGGCGGCC GCTACTCGGA CGAGTGGCAT
CGCGCCCACC TGTACAACCC GCGCAACGTC GTGCCGGAGT CGAAGATGCC CGCCTACCCC
TGGCTGGTGG AGAACACCCT CGACGGCCGC GACACCGCGA AGAAGATGGA AGTCATGCGC
GGCTTCGGCA TCCCCTACAC CGACGAGGAC ATCGCTGGTG CTCGCGACGC CGTGAAGGGC
AAGACCGAGA TGGACGCGCT GGTCGCGTAC CTGCAGGTTC TCGGCACTTC CATCAAGAAC
AAACGGTAA
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| Protein sequence | MKHEIIEKNI GLMALLMVIA VSIGGLTQIV PLFFQDVTNE PVEGLKPYTA LQLEGRDIYI
KEGCVGCHSQ MIRPFRAETE RYGHYSVAGE SVWDHPFLWG SKRTGPDLAR VGGRYSDEWH
RAHLYNPRNV VPESKMPAYP WLVENTLDGR DTAKKMEVMR GFGIPYTDED IAGARDAVKG
KTEMDALVAY LQVLGTSIKN KR
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