Gene Pmen_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2601 
Symbol 
ID5107911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2865370 
End bp2865549 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content66% 
IMG OID640503845 
ProductCbb3-type cytochrome oxidase component 
Protein accessionYP_001188089 
Protein GI146307624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000197802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.667935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGC TTATCGATAT CGGCACCCTG CGCGGCCTAG GCACCGCGCT GGTTCTGCTC 
GCCTTCACCG CCGTCACCCT CTGGGCCTAC AGCGGCAAGC GCCGCGACGC CTTCGCCGAA
GCGGCCAACC TGCCCTTCGC CGATGAGCCC AAGCCCGCCG TTTCGAGGAT CCAAGCATGA
 
Protein sequence
MFELIDIGTL RGLGTALVLL AFTAVTLWAY SGKRRDAFAE AANLPFADEP KPAVSRIQA