| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2600 |
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| Symbol | |
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| ID | 5107910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2864756 |
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| End bp | 2865364 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503844 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_001188088 |
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| Protein GI | 146307623 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000341052 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.740342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACG AGATTCTCGA GAAGAACATC GGCCTGATGG CCCTGGTGAT GATCCTGGCG
GTCAGCATCG GCGGCCTGAC CCAGATCGTT CCGCTGTTCT TCCAGGACGT CACCAACGAG
CCGGTCGATG GCCTCAAGCC CTACACCGCA CTGCAACTGG AAGGTCGCGA CATCTACATC
CGCGAGGGCT GCGTCGGCTG CCACTCGCAG ATGATCCGCC CGTTCCGCGC CGAGACCGAG
CGCTACGGCC ACTACTCCGT CGCCGGCGAG AGCGTCTGGG ATCACCCCTT CCTGTGGGGC
TCCAAGCGCA CCGGTCCGGA CCTGGCCCGC GTCGGCGGCC GCTACTCGGA CGAGTGGCAT
CGCGCCCACC TGTACAACCC GCGCAACGTC GTGCCGGAGT CGATCATGCC CGCCTACCCC
TGGCTGGTGG AGCACAACCT CGACGGCAAG GACACCGCCA AGAAGATGAG CGCACTGCGC
ACATTGGGCG TGCCCTACAG CGACGCCGAC ATCGCCGCCG CCGGTGACGC GGTCAAGGGC
AAGACCGAGA TGGACGCCCT GGTCGCCTAC CTGCAGGTGC TCGGCACCGC CGTGAAGAAC
AAAAGGTGA
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| Protein sequence | MKHEILEKNI GLMALVMILA VSIGGLTQIV PLFFQDVTNE PVDGLKPYTA LQLEGRDIYI
REGCVGCHSQ MIRPFRAETE RYGHYSVAGE SVWDHPFLWG SKRTGPDLAR VGGRYSDEWH
RAHLYNPRNV VPESIMPAYP WLVEHNLDGK DTAKKMSALR TLGVPYSDAD IAAAGDAVKG
KTEMDALVAY LQVLGTAVKN KR
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