| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2590 |
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| Symbol | |
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| ID | 5107900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2853047 |
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| End bp | 2855191 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503834 |
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| Product | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001188078 |
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| Protein GI | 146307613 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.224998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACG CCATCCGTTA CGAAAAGGGC CAGGACAATA TCGTCGTCCT GACCATGGAC
ATGCCCGGCC AGAGCGCCAA CACCATGAAC GCGGTCTACC GCGAGGCCAT GGGTCTGATC
GTCGATCGTC TGGAAGCGGA AAGGGATTCG ATCGCCGGGG TGATCGTCAC CTCGGCGAAG
AAAACCTTCT TCGCCGGTGG TGACCTCAAC GAACTGATCA AGGTCACCCA GGCCGAGGCC
CAGGGCTTCT ACGAGATGAT CCTCAGGATC AAGGGCCAGT TGCGCCGTCT GGAAACCCTC
GGCAAACCTG TGGTCGCCGC CATCAACGGA GCAGCGCTGG GCGGCGGCTG GGAAATCGCC
CTGGCCTGTC ACCACCGCAT CGCGCTAAAC GAAAGCCACG TGCAGCTCGG CCTGCCGGAG
GTCACCCTCG GCCTGCTGCC GGGCGGCGGC GGGGTGGTGC GCATGGTGCG CCTGCTTGGT
CTGGAAAAGG CGCTGCCGTA TCTGGCCGAA GGCAAGAAGG TACGCCCGGA CGCTGCGCTC
AAGGCCGGCC TGATTCACGA TCTGGCCAGC GACCGCGAGG AGATGCTGGC CAAGGCCCGC
GCCTGGATCG CCGCCAACCC GGCGGCCAAG CAGCCGTGGG ACGTGCAGGG CTACAAGATT
CCTGGCGGCA CGCCCAGTTC GCCGAACGTG GCGCAGATGC TGGCCATCGC CCCGAGCGTG
CTGCGCGACA AGACCAAGGG CTGCTTCCCG GCGCCGGAGA AGATCCTGTG CGCCGCTGTG
GAAGGTGCGC AGGTCGACTT CGACACCGCG CAGATCATCG AGGCGCGCTA CTTCACCGAG
CTGACCTGCG GTCAGGTGGC GAAGAACATG ATCGGCACCT TCTGGTTCCA GCTCAATGAG
ATCAACGCTG GCGGCTCGCG CCCGCAGGGC TACCCGAAAA CCCAGACGAA GAAGGTCGGC
GTGCTCGGTG CCGGCATGAT GGGTGCCGGT ATCGCCTACG TATCGGCAGC GGCCGGCATC
GAGGTGGTGC TCAAGGATGT GTCCGTCGAA GCGGCGGAGA AGGGCAAGGC CTACTCGGCC
AAGCTGCTGG ACAAGAAAGT CGGCAAGGGC CATATGAGTG GCGAGCAACG CGACGCCTTC
CTGGCGCGGA TCAAGGCCAC CGATAGCGAG GCGGATTTCG CCGGCTGCGA TCTGATCATC
GAAGCCGTAT TCGAGGACCG TGCGCTCAAG GGCAAGGTCA CCGCTGCCGC CGAGGCCGCG
GCGCTGAGCG ATGCGGTGAT CGCCTCCAAC ACCTCGACGC TGCCGATCAC CGGTCTGGCG
ACTGCCGTGG CAAAACCGGA GAAATTCATC GGCCTGCATT TCTTCAGTCC GGTGGACAAG
ATGCAGCTGG TGGAGATTGT CCGCGGCGAG CAAACCTCGG ATGAGACCCT GGCGCGTGGC
TTCGACTACG TCATGCAGAT CAAAAAGACC CCCATCGTGG TCAACGACAG CCGCGGCTTC
TTCACCTCGC GCGTGTTCGG CACCTTCACC AACGAAGGCC TGGCCATGCT TGGCGAAGGC
GTCAGCGCCG CGATGATCGA GAACGAGGCG CGCAAGGCCG GCATGCCGGT CGGCCCGCTG
GCGATCAGCG ACGAAGTGTC GATGAGCCTG ATGAACCATA TCCGCCAGCA GACCATCAAG
GACCTGGCCG CCGAGGGCAA ATCCATCCCC GAGCATCCGG CCTTTGCTGT CATCGATCTG
ATGCTTAACG AGTACAAGCG TCCGGGCAAA GCGGCGGGCA TGGGCTTCTA CGATTACCCG
GCCGGGGGCA AGAAGCACCT GTGGCCGGAG CTCAAGGCAC GTTTCGAAAA GGCCGATGCA
CAGATCTCGC AGGAGGACGT GCGCGACCGC ATTCTGTTCA TCCAGGCCAT CGAGACGGTG
CGCTGCGTGG AAGAGGGCGT GCTGAAGTCG GTGGCCGACG CCAATATCGG CTCGATCTTC
GGCATCGGCT TCGCCGCCTG GACCGGCGGT GCGCTGCAGT TTATCAATCA GTACGGGGTG
AAAGACTTCG TCGCGCGGGC CCAGTACCTG GCCGAACAGT ACGGCGAGCG CTTCCTGCCA
CCGGCGCGGT TGCTGGAGAA GGCGGCCAAG GGCGAAACCT TCTGA
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| Protein sequence | MTDAIRYEKG QDNIVVLTMD MPGQSANTMN AVYREAMGLI VDRLEAERDS IAGVIVTSAK
KTFFAGGDLN ELIKVTQAEA QGFYEMILRI KGQLRRLETL GKPVVAAING AALGGGWEIA
LACHHRIALN ESHVQLGLPE VTLGLLPGGG GVVRMVRLLG LEKALPYLAE GKKVRPDAAL
KAGLIHDLAS DREEMLAKAR AWIAANPAAK QPWDVQGYKI PGGTPSSPNV AQMLAIAPSV
LRDKTKGCFP APEKILCAAV EGAQVDFDTA QIIEARYFTE LTCGQVAKNM IGTFWFQLNE
INAGGSRPQG YPKTQTKKVG VLGAGMMGAG IAYVSAAAGI EVVLKDVSVE AAEKGKAYSA
KLLDKKVGKG HMSGEQRDAF LARIKATDSE ADFAGCDLII EAVFEDRALK GKVTAAAEAA
ALSDAVIASN TSTLPITGLA TAVAKPEKFI GLHFFSPVDK MQLVEIVRGE QTSDETLARG
FDYVMQIKKT PIVVNDSRGF FTSRVFGTFT NEGLAMLGEG VSAAMIENEA RKAGMPVGPL
AISDEVSMSL MNHIRQQTIK DLAAEGKSIP EHPAFAVIDL MLNEYKRPGK AAGMGFYDYP
AGGKKHLWPE LKARFEKADA QISQEDVRDR ILFIQAIETV RCVEEGVLKS VADANIGSIF
GIGFAAWTGG ALQFINQYGV KDFVARAQYL AEQYGERFLP PARLLEKAAK GETF
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