| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2584 |
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| Symbol | |
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| ID | 5108051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2849916 |
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| End bp | 2850638 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503828 |
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| Product | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| Protein accession | YP_001188072 |
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| Protein GI | 146307607 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.176098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0493752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCTTCG TTTTGCGCAT GCTGCTCATG GGCGTGCATT TCGTTATCGC CGGCCTGGCC
GGTCTGCTGC TCGGCCTGTG CCGCCCGTTC AACCCCGACA ACAGCCGCCT CTGTGCCCGC
CTCTATTCGT TGCCCGCCCT GTGCCTGCTG CGCCTGAAGC TGAAGACCGA TGTGCGCCCC
CTGCTGGAAC ATCAACGCTC CTGCGTGATC ATCGCCAACC ATCAGTCCAA CTTCGATCTC
TACGTGCTCG GCCGCGTGGT ACCGGAGCGC ACCGTGAGCA TCGGCAAGAA GAGCCTCAAG
TGGGTGCCGT TCTTCGGCCA GCTGTACTGG CTGGCCGGCA ACGTGCTGAT CGACCGCAGC
AATGCCGTCG CTGCCAAGCG CGCGATGCTG ACCACTACCG AGACCCTGCG CCATCGCGAC
ACCTCGATCT GGGTCTTTCC CGAGGGCACG CGCAACCTCG GCCGCGGCCT GCTGCCGTTC
AAGAAAGGCG CGTTTCAGAT GGCGATCACC GCCGGCGTGC CGATCATCCC GGTATGCGTG
AGCAACTACG CCAAGTCCAT GCGCCTGAAC CGCTGGCACA GCGGCCGCAT TCTCATCCGT
TCGCTGCCGG CGATCCCCAC GGCCGGCCTG AGCCTGGACG ACATGCCGGC ACTGATGGAG
CGCTGCCAGC AGGCCATGAG CGAGTGCATC GCCAGCCTGG ATCAGGAGCT GGCCAGGGCG
TGA
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| Protein sequence | MLFVLRMLLM GVHFVIAGLA GLLLGLCRPF NPDNSRLCAR LYSLPALCLL RLKLKTDVRP
LLEHQRSCVI IANHQSNFDL YVLGRVVPER TVSIGKKSLK WVPFFGQLYW LAGNVLIDRS
NAVAAKRAML TTTETLRHRD TSIWVFPEGT RNLGRGLLPF KKGAFQMAIT AGVPIIPVCV
SNYAKSMRLN RWHSGRILIR SLPAIPTAGL SLDDMPALME RCQQAMSECI ASLDQELARA
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