Gene Pmen_2582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2582 
Symbol 
ID5108049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2847259 
End bp2848371 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content65% 
IMG OID640503826 
Producthypothetical protein 
Protein accessionYP_001188070 
Protein GI146307605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0495255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0081508 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAACG ATCTTGTCGC AACGTCTAGC AAGCGTAGTT ACGCCGCCGT GATTGGAGCT 
GCAGTAACAG GCTCTTTACT GAGTTTCGCC AGCCATGCCG AACTGCGCCC GGAGCTGGCT
CCCGGCGGTA ACTTCGCACT GGAAAACTGG TCGCTGACCT TGCCGGTGGA CGAGGAAGGA
GGCAACCAGG GCCGCGCTCA GACCCTGTAT CCCGACCGGC TCAGCGGTCC GCAGGGTTAC
ACCTCCTCCT ACTTCCGCAC CGACACCGAC GGCGCCATGA CCTTCTGGGC TCCCGCCAAC
GGTGCCCTTT CGGCTCGCGC CGACTATGCC CGCGCCGAAC TGCGGCAGAT GATCGACCCC
AGCTCCAATG CGGTTAACTG GGACAGTCAG GGCCGCGCTC ACCTGGACGC ACGCCTGCGC
GTTCTGCAGG TGCCGGTAGG CAACGGCCTG GTCGCCGTTG GCCAGATCCA CGCCTACGAG
GCCATGCCGC TGGTCACCCT GTACTACCAG TACGACATGG ATGCCCAGAC CGGTCGCCTC
TTCGCCAGGG TCAAGCAGAG CCCGGAGGGC GCCGAGGAGG CCAAGCGCTA CAACCTGGCC
GAGGGCATCC AGCTGGGCCA GGCGTTCGTC TATCGCCTGG GCATGGCGCG CAACCGTGAC
GGCGTGGCCG AGGTGGCCGT TACCATCAAT GGCTCGCAGG TCCTGCAGGT TCCGCTGGAC
CCCGCCTGGG ACAGCCGCAC CTTCTACTTC AAGGCAGGCG CCTTCCTCAA CAGCCGCAGC
GACAACAGCG AAGATGGCGC GCTGGTCAAG TTCTATCGAC TGGCCACCAG CCACCCGGCT
GCTGGGCTGC ATATCACCCA GCTCTCCGCA TTGCCGCCGG CATCGGTTGG CACCTCCTAC
TCCGTGCAGC TGGAATCGCG CGGCGGCGTG GGCGGCACGA CCTGGCGCCT GGTCAGCGGC
TTCCCGCCGG CCGGCCTGAC CCTGAGCAGC GACGGCGTGC TCAGTGGCGA GCCGCAGAAT
GCCACGTCGA TTCCCGATGA CTTCACCGCG CAGATTCGCG ACGCCAACGG AAACACCGTT
TCCAAGAAGT TCTCCATCGT CATCAATCCC TGA
 
Protein sequence
MNNDLVATSS KRSYAAVIGA AVTGSLLSFA SHAELRPELA PGGNFALENW SLTLPVDEEG 
GNQGRAQTLY PDRLSGPQGY TSSYFRTDTD GAMTFWAPAN GALSARADYA RAELRQMIDP
SSNAVNWDSQ GRAHLDARLR VLQVPVGNGL VAVGQIHAYE AMPLVTLYYQ YDMDAQTGRL
FARVKQSPEG AEEAKRYNLA EGIQLGQAFV YRLGMARNRD GVAEVAVTIN GSQVLQVPLD
PAWDSRTFYF KAGAFLNSRS DNSEDGALVK FYRLATSHPA AGLHITQLSA LPPASVGTSY
SVQLESRGGV GGTTWRLVSG FPPAGLTLSS DGVLSGEPQN ATSIPDDFTA QIRDANGNTV
SKKFSIVINP