Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2582 |
Symbol | |
ID | 5108049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 2847259 |
End bp | 2848371 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640503826 |
Product | hypothetical protein |
Protein accession | YP_001188070 |
Protein GI | 146307605 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0495255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0081508 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAACG ATCTTGTCGC AACGTCTAGC AAGCGTAGTT ACGCCGCCGT GATTGGAGCT GCAGTAACAG GCTCTTTACT GAGTTTCGCC AGCCATGCCG AACTGCGCCC GGAGCTGGCT CCCGGCGGTA ACTTCGCACT GGAAAACTGG TCGCTGACCT TGCCGGTGGA CGAGGAAGGA GGCAACCAGG GCCGCGCTCA GACCCTGTAT CCCGACCGGC TCAGCGGTCC GCAGGGTTAC ACCTCCTCCT ACTTCCGCAC CGACACCGAC GGCGCCATGA CCTTCTGGGC TCCCGCCAAC GGTGCCCTTT CGGCTCGCGC CGACTATGCC CGCGCCGAAC TGCGGCAGAT GATCGACCCC AGCTCCAATG CGGTTAACTG GGACAGTCAG GGCCGCGCTC ACCTGGACGC ACGCCTGCGC GTTCTGCAGG TGCCGGTAGG CAACGGCCTG GTCGCCGTTG GCCAGATCCA CGCCTACGAG GCCATGCCGC TGGTCACCCT GTACTACCAG TACGACATGG ATGCCCAGAC CGGTCGCCTC TTCGCCAGGG TCAAGCAGAG CCCGGAGGGC GCCGAGGAGG CCAAGCGCTA CAACCTGGCC GAGGGCATCC AGCTGGGCCA GGCGTTCGTC TATCGCCTGG GCATGGCGCG CAACCGTGAC GGCGTGGCCG AGGTGGCCGT TACCATCAAT GGCTCGCAGG TCCTGCAGGT TCCGCTGGAC CCCGCCTGGG ACAGCCGCAC CTTCTACTTC AAGGCAGGCG CCTTCCTCAA CAGCCGCAGC GACAACAGCG AAGATGGCGC GCTGGTCAAG TTCTATCGAC TGGCCACCAG CCACCCGGCT GCTGGGCTGC ATATCACCCA GCTCTCCGCA TTGCCGCCGG CATCGGTTGG CACCTCCTAC TCCGTGCAGC TGGAATCGCG CGGCGGCGTG GGCGGCACGA CCTGGCGCCT GGTCAGCGGC TTCCCGCCGG CCGGCCTGAC CCTGAGCAGC GACGGCGTGC TCAGTGGCGA GCCGCAGAAT GCCACGTCGA TTCCCGATGA CTTCACCGCG CAGATTCGCG ACGCCAACGG AAACACCGTT TCCAAGAAGT TCTCCATCGT CATCAATCCC TGA
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Protein sequence | MNNDLVATSS KRSYAAVIGA AVTGSLLSFA SHAELRPELA PGGNFALENW SLTLPVDEEG GNQGRAQTLY PDRLSGPQGY TSSYFRTDTD GAMTFWAPAN GALSARADYA RAELRQMIDP SSNAVNWDSQ GRAHLDARLR VLQVPVGNGL VAVGQIHAYE AMPLVTLYYQ YDMDAQTGRL FARVKQSPEG AEEAKRYNLA EGIQLGQAFV YRLGMARNRD GVAEVAVTIN GSQVLQVPLD PAWDSRTFYF KAGAFLNSRS DNSEDGALVK FYRLATSHPA AGLHITQLSA LPPASVGTSY SVQLESRGGV GGTTWRLVSG FPPAGLTLSS DGVLSGEPQN ATSIPDDFTA QIRDANGNTV SKKFSIVINP
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