| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2580 |
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| Symbol | |
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| ID | 5108047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2845211 |
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| End bp | 2846422 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640503824 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001188068 |
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| Protein GI | 146307603 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.457398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00316434 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAC AGCATATCCC TCGCGGCGAC GCCCTGGCCT GGGTCGGCGG CAGCGATGCA
CCGGAAAAGA GCGCGCTGAA CATCGGCTTC ATGGCCCTGA GCGACTCCGC CTCGGTGATT
GTGGCCGCCA CCCAGGGCTT CGCCGAGAAG TACGGCCTGA GCCTCAAACT GCAGCGCCAG
GCCTCCTGGG CCGGCCTGCG CGACCGCCTG CTCAGCGGCG AGCTGGACGC CGCCCACAGC
CTGTACGGCT TGATCTACGG CGTGCAACTC GGCCTCGGTG GCGCCGCGGC AACCGACATG
GCGGTGCTCA TGGGGCTGAA CCAGAACGGC CAGAGCATCA ACCTGTCGCA CACGCTGCAA
AGCGCCGGCG TGACCAGCGG CGAAGCACTG CACCAGCATG TGCACCAAAA TAAAGCGCGA
CTGACCTTCG CGCAGACCTT CCCCACCGGC ACCCATGCCA TGTGGCTTTA CTACTGGCTG
GCCAGCCAGG GCATCCACCC GCTGCGCGAC GTGGACAGCG TGGTGGTGCC ACCGCCGCAG
ATGATCGAAC ACCTGGTGGC CAAGCGCATC GACGGTTTCT GCGTTGGCGA ACCCTGGACC
GCCAAGGCGG TCGACGAGCA GCTCGGCTGC ACCGTTACCA CCATCCAGGC GATCTGGCCG
GATCATCCGG AAAAGGTGCT GGGATGCAGG CGCGCGTTTG CCGAGCAGAA TCCCAATACC
GCTCGCGCAC TGATCATGGC GGTGCTCGAT GCCGCGCGCT TCATCGATCA GAGCGAGGAG
AACAAGCGCA GCACCGCCCA GTTGCTCAGC GGCAGCGATT ACGTCGACGC ACCGGCCTCG
GTCATCACTC CGCGCTTTCT CGGCCAGTAT CAGGATGGCC TGGGGCATGC CTGGCAGGAT
GCCCACCCGC TGCGCTTTCA CGGCGAGGGC GCCGTGAACA TGCCCTACCT GTCCGACGCC
ATGTGGTTCA TGACCCAGTT TCGGCGCTGG GGCCTGCTGC GCAGCGACCC CGACTACCTG
GGCGTGGCTC GCCAGGTGCA GCAACTGAAT CTCTACCGAC AGGCCGCCGA GGCGCTCAAG
ATCCCCGTCC CCGCGGAGAT GCGCAGTTCC ATGCTGCGGG ACGGCAGTTG CTGGGATGGC
AGCGACCCTG TCGCCTACGC CCGCAGCTTT CGCCTCCACG CCCTGGCCGA CAGCCCCGCC
GTCGCCCTGT AA
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| Protein sequence | MSEQHIPRGD ALAWVGGSDA PEKSALNIGF MALSDSASVI VAATQGFAEK YGLSLKLQRQ
ASWAGLRDRL LSGELDAAHS LYGLIYGVQL GLGGAAATDM AVLMGLNQNG QSINLSHTLQ
SAGVTSGEAL HQHVHQNKAR LTFAQTFPTG THAMWLYYWL ASQGIHPLRD VDSVVVPPPQ
MIEHLVAKRI DGFCVGEPWT AKAVDEQLGC TVTTIQAIWP DHPEKVLGCR RAFAEQNPNT
ARALIMAVLD AARFIDQSEE NKRSTAQLLS GSDYVDAPAS VITPRFLGQY QDGLGHAWQD
AHPLRFHGEG AVNMPYLSDA MWFMTQFRRW GLLRSDPDYL GVARQVQQLN LYRQAAEALK
IPVPAEMRSS MLRDGSCWDG SDPVAYARSF RLHALADSPA VAL
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