| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2574 |
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| Symbol | |
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| ID | 5108041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2838477 |
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| End bp | 2839205 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640503818 |
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| Product | UDP-2,3-diacylglucosamine hydrolase |
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| Protein accession | YP_001188062 |
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| Protein GI | 146307597 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.447358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00093779 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCTGC TGATCTCCGA TCTGCACCTC GAAGAGAAAC GCCCGGACAT CACCCGGGCG
TTTCTGCATT TTCTCGCCAC CCGCGCGCGC CAGGCCGAGG CGCTGTACAT CCTCGGCGAC
TTCTTCGAAG TCTGGATCGG CGACGACGGC ATGACGCCCT TCCAGCATGA GATCGCCGGC
GCCCTGCGCG AGCTGAGCGA CAGCGGTACG CGCATCTACC TGATGCACGG CAATCGCGAC
TTTCTTATCG GCAAGCGCTT CTGCCGCGAG GCGGGCTGCA CTTTGCTGGG CGATCCGCAC
AGGGTGCAGA TGAATGGCGA GCCCGTGCTG CTGATGCACG GCGACAGCCT GTGCACCCTG
GACGTCGGTT ACATGAAACT GCGCCGCTGG CTACGCAACC CGCTGTCGCT GTTGATCCTG
CGCAACCTGC CGCTCGCTAC CCGACAGAAG CTGGCGCGCA AGCTACGCAA CGAAAGCCGC
GCACAGACGC GGATGAAGGC CAGCGAAATC GTCGATGTCA CGCCCGAGGA AGTGGTCAGA
GTGATGGGCG AGTACGATGT GCGTACGCTG ATCCATGGTC ATACCCATCG GCCGGCGGTG
CATGAGCTGG AAGTCAACGG CCAACCGGCA CGGCGCATCG TGCTGGGGGA CTGGGATCGC
CAGGGCTGGG CGCTGCAGGT CGATGGCGAG GGGTTCAACC AGGCGCCGTT CGAGCTGACG
CCAGCCTGA
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| Protein sequence | MILLISDLHL EEKRPDITRA FLHFLATRAR QAEALYILGD FFEVWIGDDG MTPFQHEIAG
ALRELSDSGT RIYLMHGNRD FLIGKRFCRE AGCTLLGDPH RVQMNGEPVL LMHGDSLCTL
DVGYMKLRRW LRNPLSLLIL RNLPLATRQK LARKLRNESR AQTRMKASEI VDVTPEEVVR
VMGEYDVRTL IHGHTHRPAV HELEVNGQPA RRIVLGDWDR QGWALQVDGE GFNQAPFELT
PA
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