| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2569 |
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| Symbol | |
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| ID | 5108036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2831225 |
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| End bp | 2832346 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503813 |
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| Product | carbohydrate kinase |
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| Protein accession | YP_001188057 |
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| Protein GI | 146307592 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component
[COG3265] Gluconate kinase |
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| TIGRFAM ID | [TIGR01313] carbohydrate kinase, thermoresistant glucokinase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00777638 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0000000380765 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCAAC AGCCTTTCAC CCTGCCTGCC CGCGCCACTC TGGTGGTCAT GGGCGTCAGC
GGCTCCGGCA AGAGCGAAAT CAGCCAGGCG GTGGCCGCCA CCCTCGGCTG GCGCCATATC
GAAGCCGACC ACTTCCATCC TCCTGCGAAC GTCGAGCGCA TGCGCGCCGG CATTCCCCTG
AGCGACGATG ACCGCAGCCA CTGGCTGGAC GCCCTGTGCG AGCAGATGCT CGCTGCACAG
GCGGCGGGCG AGGGCTTCGT GCTAGCCTGC TCGGCACTCA AGCGCGTCTA CCGTGAGCGT
CTGCGCGCGG CGGTGCCAGG GCTGCAGTTC GTCCATCTGC AGATCGACCA TGCCACCGCG
CTGCAGCGGG TCGGCGCGCG CCCCGGACAC TTCATGCCCA CCTCACTGGT CGACAGCCAG
TTCGCCACCC TCGAAACGCC GGCCGGCGAG CCGCATGTCT GCGTGCTGAA TGCGGCCGAC
AGCCGCGAGT CGCTGCTGGA GCAGATCCGT GCCTGGCTGC GTCGCGATCT GCCGGAGGCT
GTTGCGGTGG AGGAGGACGT TGCTGCCATG CCTGAGATTG ATAGCGCTAA CCAGGGGCCG
CAACTGGGCG CCGAGCCGAT TTACGAAGGG CGCCTGGCGC GCCTGTTCGA TCGCCTCACC
GACGGCCTGA TGGCCGTTCT GATGGCATTC ATGGTGGTGG CGGTGTTTGC CAACGTGGTG
CTGCGCTACG CCTTTGGCAC CGGCTGGCCG GGCGCCGAGG AGCTGTCGCG GCTGGCCTTC
GTCTGGCTGG TGTTCGTCGG CGTGGCCTCG AGCATGCGCC GCGGCGAGCT GATGACCTTC
CGCATGATCC GCGACCGTTT TCCGCAACTG GCGCAGCGTC TGGTGGATTC GCTGAGCTGG
CTGCTGGTGG CCGGCGCCAG CCTGCTGTCG GCCTGGGGCG CGTGGATGCA GGTGCAGTAC
GGCTGGGGCA ACCACAGCAC GGTAGTCGGC TATCCCGTGG TGCTGGCCAT GCTGCCGGTG
CTGGCGAGCA TGGCGGTGCT GGCGATTCTC GCCGTGGTGC AGCTGGTCAA TCTCTGGCGG
CACGCGCCGC AGGCAAGGCT GACGCAGGCG CAGGTCGAAT GA
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| Protein sequence | MQQQPFTLPA RATLVVMGVS GSGKSEISQA VAATLGWRHI EADHFHPPAN VERMRAGIPL
SDDDRSHWLD ALCEQMLAAQ AAGEGFVLAC SALKRVYRER LRAAVPGLQF VHLQIDHATA
LQRVGARPGH FMPTSLVDSQ FATLETPAGE PHVCVLNAAD SRESLLEQIR AWLRRDLPEA
VAVEEDVAAM PEIDSANQGP QLGAEPIYEG RLARLFDRLT DGLMAVLMAF MVVAVFANVV
LRYAFGTGWP GAEELSRLAF VWLVFVGVAS SMRRGELMTF RMIRDRFPQL AQRLVDSLSW
LLVAGASLLS AWGAWMQVQY GWGNHSTVVG YPVVLAMLPV LASMAVLAIL AVVQLVNLWR
HAPQARLTQA QVE
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