| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2566 |
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| Symbol | |
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| ID | 5108033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2827684 |
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| End bp | 2828703 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640503810 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001188054 |
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| Protein GI | 146307589 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.257344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000000070204 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCAAC GTCGTCGCCG TTCCGCCGAA CGCGTCACCC TGTCGGATGT GGCCAAGGCT
GCCGGCTGCT CGCTGATGTC CGCCTCGCGC GCGCTGTCGC AGCCGGGCAG GGTTTCCGAC
GCCCTGCGCG AGCAGGTGAT GCGTGCCGCT CAGGCGCTCG GCTATGTGCC CAATCCGGCG
GCGCGGGCGC TGGCCAGTTC GCGCTCGAAT CTGGTGGCGG TGGTGATTCC CTCGCTGTCC
AACTCGGTGT TCGTCGACAC CGTCGAGGCC ATCCAGCGGG TGCTGATGCC GGCCGGCTTC
GAGATGATGA TCGGCGTCAG CCATTACCGG GTCGAGGAAG ACGAGCGCCT GCTGCGCTCC
TACCTGGCGC ACCAGCCGGC GGGTCTGCTG GTCACCGGCT TCGAGCGCAG CGACGCGGCG
CGCGAGATTC TCGGCGCCAG CACCTGTCCG CTGGTGACGC TGATGGAGCT GAGCGACGAA
CCCGAGGACT ACTGCGTCGG TTTCTCCCAG ATCGAGGCGG GTGCCGCCAT GACCCGCGCC
CTGGTGCAGC GCGGCTATCG GCACATCGCC TTCGCCGCTG CCCAGCTCGA CCCGCGTACC
CTGCAGCGCG CCGAAGGCTA TCGCCAGGTG ATGCGTTACC TGGGGCGCCA CGACCCGGCG
CTGGAGCTGC TCACTCCCGA GCTGTCGTCC ATCGGCCTGG GCGCCGAGCT GCTCGACCGC
CTGCTGGCGC AGCAGCCGCA GATCGATGCG GTGTTCTTCA ACAACGACGA CCTGGCCATG
GGCGCGCTGT TTCGCGCCCG TCAGCTGGGC CTCGAGGTGC CGGGGCGGCT GGCCATCGCC
GGTTTCAACG ACCTGCCGGC GGCGGCCTGG ATGCATCCGG CGCTGAGCAC GGTGCGCACC
ACGCGCGGAC GCATCGGGGA GCTGGCGGCG AACATGCTGC TGGCACTGAT GCGCGGCGAG
ACGCCGGAGC AGCACTGCAT CGATGTCGGC TTCGAGCTGG TGATGCGCGA CAGCGCCTGA
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| Protein sequence | MSQRRRRSAE RVTLSDVAKA AGCSLMSASR ALSQPGRVSD ALREQVMRAA QALGYVPNPA
ARALASSRSN LVAVVIPSLS NSVFVDTVEA IQRVLMPAGF EMMIGVSHYR VEEDERLLRS
YLAHQPAGLL VTGFERSDAA REILGASTCP LVTLMELSDE PEDYCVGFSQ IEAGAAMTRA
LVQRGYRHIA FAAAQLDPRT LQRAEGYRQV MRYLGRHDPA LELLTPELSS IGLGAELLDR
LLAQQPQIDA VFFNNDDLAM GALFRARQLG LEVPGRLAIA GFNDLPAAAW MHPALSTVRT
TRGRIGELAA NMLLALMRGE TPEQHCIDVG FELVMRDSA
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