Gene Pmen_2565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2565 
Symbol 
ID5108032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2826660 
End bp2827679 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content66% 
IMG OID640503809 
Productlipase chaperone 
Protein accessionYP_001188053 
Protein GI146307588 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5380] Lipase chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.18618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000061931 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACAAAG CCCTGTTTGC CCTGCCTCTG CTGTTCGCCG TCTGCCTGGC GCTGATGCTC 
TACCTCGAGC CCGGGCATCT GCCTGATCGC TTCAGCCCTG CTGCCGAGAC CACCGCCGTA
TCGCCAACAT CGATCGACCA GGGCGCTGCG TCGGTATTCC CCGCCTCCGA GAAAGCGAGC
AGGAAGCTTG CTCTGCCCAG TTCCTTCGCC GGCACCCAGG TCGATGGCAG CTTTCGCGTC
GACGCCGACG GCAATCTGAT CGTCAGCGAG GACATTCGCC GCATCTTCGA CTACTTCCTG
GCCAGCATCG GCGAGGAAAG CCTGCAGGCC AGCATTGCGC GTCTGCGTGG CTATATCGAC
AGCCAACTGG CCGAGCCGGC ACGCGCCCGC GCGCAGGCCC TGCTCGATCA GTACCTGGCC
TACAAACGCG AGCTGGTGCT GCTGGAGCGC GACCTGCCGC AGCTGGCCAG CCTGGATGCC
CTGCGCCAGC GTGAAGCCGC GGTACAGGCC CTGCGCGCAC GGCTGTTCGA CAGCGAAACC
CACCAGGCCT TCTTCGCTCG CGAGGAAGGC TACAACCGCT TCACCCTCGA GCGACTGGCC
ATTCAGCATG ACGCCAGGCT GAGCGACGAC GAGAAAGGCC TGGCCGTGGA CCGTCTGCGC
GCCTCGCTGC CGGAGGAGAT GCAGGACATG GTTCTGCCGC AGCTGCAGCA GGAGCTGCGC
CAGCACACCG CGCGGCTGCA GGCACAAGGC GCCAGTGCGG CGCAGATCCG CCAACTGCGT
CAGCAACTGG TGGGCGCAGA AGCCACCACG CGTTTGGAAG TGCTGGATCA GCAGCGACAG
AGCTGGCAGA AAAGGCTGGA TGACTATCTC GCCGCCAAGG CAGACATCGA GGCCAACACG
GGCCTCAGCA GCGGCGACAA ACGCGCCGCC ATCGAGGCGC TGGCCGCCGA GCGCTTCGAC
GAGCGCGAGC GTCTGCGCCT GGATGCGGCC GAGCAACTGG CCGCCGCCAA CCGTCAGTAG
 
Protein sequence
MNKALFALPL LFAVCLALML YLEPGHLPDR FSPAAETTAV SPTSIDQGAA SVFPASEKAS 
RKLALPSSFA GTQVDGSFRV DADGNLIVSE DIRRIFDYFL ASIGEESLQA SIARLRGYID
SQLAEPARAR AQALLDQYLA YKRELVLLER DLPQLASLDA LRQREAAVQA LRARLFDSET
HQAFFAREEG YNRFTLERLA IQHDARLSDD EKGLAVDRLR ASLPEEMQDM VLPQLQQELR
QHTARLQAQG ASAAQIRQLR QQLVGAEATT RLEVLDQQRQ SWQKRLDDYL AAKADIEANT
GLSSGDKRAA IEALAAERFD ERERLRLDAA EQLAAANRQ