| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2560 |
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| Symbol | |
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| ID | 5108027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2821193 |
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| End bp | 2823697 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640503804 |
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| Product | hypothetical protein |
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| Protein accession | YP_001188048 |
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| Protein GI | 146307583 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00315514 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000000000119307 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCGCG TGCCGCTCAC CCGCCTGCTG CTGCTCGCCG CCCGCCAGTT GCTGCGCGAT
GCCCGCGCCG GGGAATTGCG CGTGCTGTTC TTCGCCCTGC TGGTGGCGGT GGCCGCCAGC
AGCGCCATCG GCTATTTCAG TGCGCGGCTG AACGACGCCA TGCTGCTGCG CGCCAGTGAG
TTCCTAGCGG CCGACCTGCG CCTGAGCGGC AGCACGCAGG CCAAGCCAGA GCAGATCGAG
GCCGGCACCC GCCTGGGCCT CGAGCATGCG CAGCTGGTGG AATTCTCCAG CGTGGTGGCA
GCGGACGAGG GTATCCAGCT GGCCAGCGTC AAGGCCGTCA GCGACAGCTA CCCGCTGCGC
GGCGAGCTGA AAAGCGCAGC TGCGCCCTAC GCTGCGGAAC AAAGCAGCGT AGGCCCGAGT
GCCGGCGAGG CCTGGGCCGA GGCGCGTCTG CTGGTCGCCC TCGATCTGCA GATAGGCGAG
GAAATCGAGA TCGGCGCCAA GCGCCTGCGC CTGACCCGCG TGCTGACCTA CGACCCGGAC
GGTGCCGGTG ATTTCTACAG CCTCACACCG CGCGTGCTGA TGCATCTCGA TGACCTGGCC
GCCACCGAGG TGGTCCAGCC CGGCAGCCGC GTGCGCTTTC GCGAACTGTG GCGCGGCGAT
GCCGACGCGC TGGGCGCCTA CCGTCAGGCG GTGGAAGCCA GCCTCGAACC CAACCAGCGC
CTGGAAGATG CTCGCGATGG CAATCGCCAG GTCGGCAGCG CGCTGGGACG TGCCGAGCGC
TACCTGAATC TGGCCAGCCT GGCCGCCGTG CTCCTGGCCG GCGTGGCCGT GGCGTTATCG
GCCGCACGCT TCGCCGCTCG CCGTTTCGAC GCCAGCGCGC TGCTGCGCTG CCTGGGGCTG
TCCCGGCGCG AGGCCCTGAC GCTGTTCGGC CTGCAGCTGG CCCTGCTCGG CCTGCTGGCC
TGCGTACTGG GTGCGTTGCT CGGTTGGGGC GGCCAATACG TCCTGTTCCA CCTGCTGCGC
GGCCTGATTC CTGCCGACCT GCCACCGGCC GACCTGTGGC CGGCGCTGGC CGGTATGGCC
ACCGGCCTGG TCGCGCTGGC CGGCTTCGCC CTGCCGCCGC TGGCGGCACT GGGCCGGGTA
CCGCCGCTGC GCGTGCTGCG CCGCGACATG CTGCCGGTGC CGGTCAGCTC CTGGCTGGTG
TACGGCGCGG CGCTGCTGGC ACTGGGTTTG ATCATGTGGC GCCTGAGCCT GGATCTGCGC
CTGACCCTGG CGCTGCTCGG CGGCGGTCTG CTGGCCGCCC TGCTGCTCGG CGGCCTGCTG
CTGCTCGGCC TGCAGAGCCT GCGCCGGTTG CTGCAACGCG CCGCCCTGCC CTGGCGCCTG
GGCCTCGGCC AGTTGCTGCG CCACCCGCTG GCAGCGGCCG GCCAGTCGCT GGCCTTCGGC
CTGATCCTGC TGGCCATGGC GCTGATCGCC CTGCTGCGTG GCGAACTGCT CGACACCTGG
CAGGATCAGT TGCCGGAGGA TGCGCCCAAT CATTTTGCCC TCAACGTGCT GCCGGCCGAG
CGCGACGCCT TCGCCGCACG CCTGGCCGAA CTCTCTCCGC ATCCGGCGCC GCTGTACCCG
GTGGTACCGG GGCGCCTGGT GACGATCAAC GACGAGCCGG TGCGCCAGCT GGTGAGCAAG
GAGAGCCGCG GCGAGCGGGC GATCCAGCGC GACCTGAGCC TGACCTGGGC CGAGCAGCTG
CCCGCCGACA ACCAGATTAC CAGTGGCCGC TGGTGGGGCG CGGCACATGC CAGCGAGCTG
CCGGGTGTTT CGGTGGAGGC GGAGCTGGCC GAGAGCCTGC AGTTGAAACT AGGCGACCGC
CTGCGCTTCA ACGTCGGCGG CGTGGAGCGC GAAGCGCAGG TCAGCAGCCT GCGCCAGGTC
GACTGGGACA GCTTCCAGCC CAACTTCTAC ATGATCTTCG AGCCGCAGAC CTTGCAGGAT
CTGCCCGCCA CCTACCTGAC CAGCTTCTAT CTGCCGCCAG GCCAGGATGC CGAGCTGATC
ACCCTCAGCC GCGCCTTCCC CAGCGTCACC CTGCTGCAGG TCGATGCCCT GCTGGCGCAG
CTGCGCAGCA TTCTGGCCCA GGTCACCCTG GCCATCGAAT ACGTGCTGCT GTTCGTGCTC
GCCGCCGGCA TCACCGTACT ACTGGCGGGG CTGCAGGCCA CGCTCGACGA ACGCATCCGC
CAGGGCGCTC TGCTGCGCGC CCTCGGCGCC GAGCGCCGCC TGCTGATCAA CGCCCGCCGC
GCCGAGTTCG GCCTGCTCGG CGCCGCCGCC GGCCTGCTCG CCGCGCTGGG CTGCGAACTG
GTGAGCTTCC TGCTCTATCG CTATGCCTTC GACATGAGCT GGCAGCCACA CCCCTGGCTG
CTCCTGCTGC CGCCGATCGG CGCCCTGCTG GTAGGCGGCG CCGGCGTGCT CGGTACCCGC
CGTGCGCTCA ACGTCAGTCC GCTGAGCGTG CTGCGCGAGG GCTGA
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| Protein sequence | MNRVPLTRLL LLAARQLLRD ARAGELRVLF FALLVAVAAS SAIGYFSARL NDAMLLRASE
FLAADLRLSG STQAKPEQIE AGTRLGLEHA QLVEFSSVVA ADEGIQLASV KAVSDSYPLR
GELKSAAAPY AAEQSSVGPS AGEAWAEARL LVALDLQIGE EIEIGAKRLR LTRVLTYDPD
GAGDFYSLTP RVLMHLDDLA ATEVVQPGSR VRFRELWRGD ADALGAYRQA VEASLEPNQR
LEDARDGNRQ VGSALGRAER YLNLASLAAV LLAGVAVALS AARFAARRFD ASALLRCLGL
SRREALTLFG LQLALLGLLA CVLGALLGWG GQYVLFHLLR GLIPADLPPA DLWPALAGMA
TGLVALAGFA LPPLAALGRV PPLRVLRRDM LPVPVSSWLV YGAALLALGL IMWRLSLDLR
LTLALLGGGL LAALLLGGLL LLGLQSLRRL LQRAALPWRL GLGQLLRHPL AAAGQSLAFG
LILLAMALIA LLRGELLDTW QDQLPEDAPN HFALNVLPAE RDAFAARLAE LSPHPAPLYP
VVPGRLVTIN DEPVRQLVSK ESRGERAIQR DLSLTWAEQL PADNQITSGR WWGAAHASEL
PGVSVEAELA ESLQLKLGDR LRFNVGGVER EAQVSSLRQV DWDSFQPNFY MIFEPQTLQD
LPATYLTSFY LPPGQDAELI TLSRAFPSVT LLQVDALLAQ LRSILAQVTL AIEYVLLFVL
AAGITVLLAG LQATLDERIR QGALLRALGA ERRLLINARR AEFGLLGAAA GLLAALGCEL
VSFLLYRYAF DMSWQPHPWL LLLPPIGALL VGGAGVLGTR RALNVSPLSV LREG
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