| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2559 |
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| Symbol | |
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| ID | 5108026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 2820510 |
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| End bp | 2821193 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503803 |
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| Product | ABC transporter related |
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| Protein accession | YP_001188047 |
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| Protein GI | 146307582 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000178082 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000000206732 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTCGA GCATTCTCGC TGCGCGGAAC CTTAGCAAAG TGGTCACCAG CGCGGAAGGC
GAGCTGACCA TTCTTCACGA CCTCGACCTC AGCCTGGAGA AAGGCGACAG CCTGGCGATA
GTCGGCAGCT CCGGTTCGGG CAAATCCACC CTGCTCGGCC TGCTCGCCGG CCTGGACCTG
CCCAGCGCCG GAAAGGTGCT GCTGGCTGGC AAGGACATCG GCGAGCTGGA TGAGGACCAG
CGCGCACGCC TGCGCGCCGA GCATGTCGGC TTCGTCTTCC AGTCCTTCCA GTTGCTCGAC
AGCCTCAATG CGCTGGAAAA CGTCATGCTG CCGCTGGAAC TGGAGGGCCG TGCCGACGCC
CGCCAGCGTG CCCGTGCTTT GCTCGAGCGG GTTGGCCTGG GGCAGCGCCT GACCCACTAC
CCACGTCAGC TCTCCGGTGG TGAGCAGCAG CGCGTCGCTA TCGCCCGCGC CTTCGCCGCC
GAGCCGGACG TACTGTTCGC CGACGAGCCC ACGGGCAACC TCGACAGTCA CACTGGCGAG
CGCATCAGCG ACCTGCTGTT CGAACTCAAT CAGGAGCGCG GCACCACCCT GGTTCTGGTC
ACCCATGACG AACGCCTGGC GCATCGCTGC CAGCGCCTGA TCCGTCTGGA AGGCGGCCAT
CTGATCGATC GCGTGGAGCC CTGA
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| Protein sequence | MTSSILAARN LSKVVTSAEG ELTILHDLDL SLEKGDSLAI VGSSGSGKST LLGLLAGLDL
PSAGKVLLAG KDIGELDEDQ RARLRAEHVG FVFQSFQLLD SLNALENVML PLELEGRADA
RQRARALLER VGLGQRLTHY PRQLSGGEQQ RVAIARAFAA EPDVLFADEP TGNLDSHTGE
RISDLLFELN QERGTTLVLV THDERLAHRC QRLIRLEGGH LIDRVEP
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