| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2556 |
|---|
| Symbol | |
|---|
| ID | 5108023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 2818529 |
|---|
| End bp | 2819485 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640503800 |
|---|
| Product | ErfK/YbiS/YcfS/YnhG family protein |
|---|
| Protein accession | YP_001188044 |
|---|
| Protein GI | 146307579 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000497106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 9.91148e-17 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTCGC GCTTCTCTGC GGTCAACCGC TGCCTGACAC TGCTCGCCCT GTGCTCGAGT
GCTGCGGTGC AGGCTCTCGA ACTCCCACTG CCGCCTCCAG GCGAGGACGT GGTCGGCCAG
GTTCAGGTGA TCAAGGCCAA GTACGAAGAC ACCTTCGCTG ACCTGGGAAC GGCCAACGAT
CTGGGTTATC TGGAAATGGT CGCGGCCAAC CCGGGTGTCG ATCCCTGGCT GCCGGGCGAG
GGCACCGAGA TCGTTCTGCC TACCCGTTAC GTGCTGCCGC CGGGCCCGCG CGAGGGCATC
GTCATCAACC TGGCCGAGTA CCGCATGTAC TACTTCCCGA AAGGCCAGAA CGTGGTGCAT
ACCTACCCGC TGGGTATCGG TCGCGAAGGC TGGGGCTCGC CGCTCGGCAC TGGGCGGGTG
ACGGTGAAGA CGCCGAATCC GGCCTGGTAT CCGCCCAAGT CGATCCGCGA GGAACATGCG
GCCGAAGGCG ACATCCTGCC CACCGTGGTA CCGCCGGGTC CGGACAATCC GCTGGGGCCG
TACAAGATGA CGCTGTCCTT CCCGGGTTAT CTCATTCATG GCTCGAACAA GAAGTTCGGT
ATCGGCATGC GCGTCAGCCA CGGTTGCTTC CGCATGCTCA ACCACAACGT GCTCGAACTG
GCGGCCATGG TGCCGGTCGG TACGCCGGTG CGCATCATCA ACGAGCCGTA CAAGTTCGGG
GTCAGCGGCG GCAGGGTTTA TCTGGAGGCT CATGCGCCAC TGGACGACGA AAACGATCCG
TCGGTAGTCG ACAAGCACAC GGCCGTGATC AATGCCCTGC TCAAGCGCGA AGAGCTCAGT
GGTCTGCGCC TGGATTGGGA AATGGTTCGG GAGGTGGTCG CGTCGGAAGA TGGCATGCCG
GTGCCGATCG CTTCGCAGAA CGACAGCGTG GTAGCGAGTA GCGATAACCC CTTCTAA
|
|---|
| Protein sequence | MLSRFSAVNR CLTLLALCSS AAVQALELPL PPPGEDVVGQ VQVIKAKYED TFADLGTAND
LGYLEMVAAN PGVDPWLPGE GTEIVLPTRY VLPPGPREGI VINLAEYRMY YFPKGQNVVH
TYPLGIGREG WGSPLGTGRV TVKTPNPAWY PPKSIREEHA AEGDILPTVV PPGPDNPLGP
YKMTLSFPGY LIHGSNKKFG IGMRVSHGCF RMLNHNVLEL AAMVPVGTPV RIINEPYKFG
VSGGRVYLEA HAPLDDENDP SVVDKHTAVI NALLKREELS GLRLDWEMVR EVVASEDGMP
VPIASQNDSV VASSDNPF
|
|---|
| |