Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2546 |
Symbol | cysB |
ID | 5108013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2810274 |
End bp | 2811248 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640503790 |
Product | transcriptional regulator CysB |
Protein accession | YP_001188034 |
Protein GI | 146307569 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00000891923 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCTTC AACAACTGCG CTACATCTGG GAAGTCGCGC ACCACGACCT CAACGTATCG GCTACCGCTC AGAGCCTGTA CACCTCGCAA CCAGGGATCA GCAAGCAGAT TCGCTTGCTC GAGGACGAGC TGGGCGTGGA AGTTTTCGCC CGCAGCGGCA AGCACCTGAC CCGCGTCACA CCCGCCGGAG AGCGGATCAT CACCACTGCC GGAGAGATTC TGCGCAAGGT CGAGAGCATC AAGCAGATCG CTCAGGAGTT CTCCAACGAG AAGAAGGGCA CGCTGTCCAT CGCCACCACC CACACCCAGG CGCGCTACGC GCTGCCGCCG GTAATCAGCG CCTTCATCAA GCAATACCCG GATGTCGCCC TGCACATGCA CCAGGGCACG CCGACCCAGA TCGCCGAAAT GGCGGCTGAC GGCAGCGTGG ATTTCGCCAT TGCCACCGAA GGTCTGGAAC TGTTCAACGA CCTGATCATG ATGCCCTGCT ACCGCTGGAA CCGCTGCGTG GTGGTGCCGC AGGGGCATCC GCTGACCAAA TTGCCCAAGC TGACGCTCGA AGCGCTGGCC GAGCACCCCA TCGTCACCTA CGTATTCGGT TTCACCGGCC GCTCGAAGCT CGACGAGGCC TTCAGTCACC GTGGGCTGAC GCCCAAGGTG GTGTTCACCG CGGCCGATGC CGACGTGATC AAGACCTACG TTCGCCTGGG GCTGGGGGTG GGCATCGTGG CCAAGATGGC GGTGGACGCC AGGCTGGACC CGGATCTGGT GGTGCTCGAC GCCGACCAGC TGTTCGAGCC GAGCGTGACC AAGATCGGCT TCCGCCGTGG CACCTTCCTG CGCGGCTTCA TGTGCGATTT CATCGAGAAG TTCGCCCCGC ACCTGACCCG CGACATGCTG GCCAAGGCCG TGCAGTGCCA CAACAAGTCC GAACTCGAAG AGCTGTTCAG CGGCGTCGAC CTGCCCGTGC ACTGA
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Protein sequence | MKLQQLRYIW EVAHHDLNVS ATAQSLYTSQ PGISKQIRLL EDELGVEVFA RSGKHLTRVT PAGERIITTA GEILRKVESI KQIAQEFSNE KKGTLSIATT HTQARYALPP VISAFIKQYP DVALHMHQGT PTQIAEMAAD GSVDFAIATE GLELFNDLIM MPCYRWNRCV VVPQGHPLTK LPKLTLEALA EHPIVTYVFG FTGRSKLDEA FSHRGLTPKV VFTAADADVI KTYVRLGLGV GIVAKMAVDA RLDPDLVVLD ADQLFEPSVT KIGFRRGTFL RGFMCDFIEK FAPHLTRDML AKAVQCHNKS ELEELFSGVD LPVH
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