| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2529 |
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| Symbol | |
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| ID | 5107996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2789550 |
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| End bp | 2790539 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640503773 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001188017 |
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| Protein GI | 146307552 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.180197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.304132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAT TCAAGGCCCT GCAGATCAGC GAAATCACCG ACAACGTCTT CCAGTGCGAA
GTGGTGGAGC GGCAGGTCGA GGACCTGCCG GCTGGTGATC TGCTGATCCG GGTGCGTTAT
TCCTCGCTCA ATTACAAGGA TGCCCTGTCG GCCAGCGGCA ACCGCGGTGT CACCAAGAGC
TATCCGCACA CGCCGGGGAT CGACGCGGCA GGCGTGGTAG AAGCTTCCAG CGTGGCCGAA
TTCGCCGTGG GCGACGAGGT GATCGTCACC GGTTACGACC TAGGCATGAA CACCGCCGGC
GGCTTCGGCC AGTACATCCG CGTGCCGGCG AGTTGGGCGA TCAAGCGGCC GCAGGGGCTG
CCGTTGCGCG ATGCGATGAT CCTCGGTACC GCCGGCCTCA CCGCCGCCCT GTGCGTGGAC
AAGCTGGAGC AGGCCGGCGT CACCCCGGAG GCCGGCACGG TGTTGGTGAC CGGCGCCACG
GGCGGCGTCG GCAGCATCGC CGTGGTGCTG CTGAAGAAGC TCGGCTATCA GGTGGCAGCG
GCTACCGGGA AGGCCGAGCA GGGCGTTTGG CTCAGTAAGC TGGGCGCCGA CGAGATCGTC
GACCGCGCAG AGCTGCAGCA GGGTGTCGAC CGTCCGATGC TCAAGGAGCG TTGGGCCGCA
GCGGTGGATA CCGTCGGCGG CGACATTCTG TTCAACGTGG TCAAGTCGCT GCAGCGCGGT
GGCAGCGTGG CCTGCTGCGG CCTTACCGCC GGTGTCGCCT TCCAGGCCAG CGTGTTGCCC
TTCATCCTGC GCGGCGTCAA CCTCCTGGGC GTGGACTCGG TGGAGCTGCC GCTGGTGGTC
AAGGCCTCGA TGTGGGACAA GCTGTCGCTG CAATGGAAGC TCGATCTCTC CGAGCTGTGT
CAGGAGGTGG AACTGGCGGA ACTGCCGGGC TCCATCGAGC GCATATTGTC CGGCGGCATG
GTCGGCCGCG TGCTGGTGCG GCTGGATTGA
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| Protein sequence | MTEFKALQIS EITDNVFQCE VVERQVEDLP AGDLLIRVRY SSLNYKDALS ASGNRGVTKS
YPHTPGIDAA GVVEASSVAE FAVGDEVIVT GYDLGMNTAG GFGQYIRVPA SWAIKRPQGL
PLRDAMILGT AGLTAALCVD KLEQAGVTPE AGTVLVTGAT GGVGSIAVVL LKKLGYQVAA
ATGKAEQGVW LSKLGADEIV DRAELQQGVD RPMLKERWAA AVDTVGGDIL FNVVKSLQRG
GSVACCGLTA GVAFQASVLP FILRGVNLLG VDSVELPLVV KASMWDKLSL QWKLDLSELC
QEVELAELPG SIERILSGGM VGRVLVRLD
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