Gene Pmen_2519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2519 
Symbol 
ID5107986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2781774 
End bp2782889 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID640503763 
ProductATP-NAD/AcoX kinase 
Protein accessionYP_001188007 
Protein GI146307542 
COG category[S] Function unknown 
COG ID[COG3199] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.58927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.410877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGTT TTCATATCGG TCTGATCATC AATCCGCTGG CCGGGCTGGG TGGCCCAGCT 
GCCTTCAAGG GCAGTGACGG CATGGCCGAG CAGGCGTTGG CTCTGGGCGT CGAGGCAAAA
GCCGCGCAGC GCACACGCAC TGCCCTGGAA CAGCTGTTGG CCCTGCGCGA GCGCATCGAA
TTCGTCAGCT ACCCGGGGGC GATGGGTGGC GAGCTATTGG CGCAGATGGG CTTCGAGCAT
CGTTTGCTGG GTGAGTTGGG TGACGGCGCG ACCACCGCCG AAGATACCCG CCGTGCGGTG
CGGCAGCTTC AGGACGCCGG TGTGGCGTTG ATTCTGTTCG CTGGCGGTGA CGGCACGGCA
CGCGACGTGT GCGCCGTGGT CAGGGAAGGG CAGCCGGTTC TGGGCATTCC GGCCGGGGTG
AAGATCCAGT CCGGCGTCTA TGCCATCAGC CCGCGGGCGG CGGGCGAGCT CACCGCGCGC
CTGGTCGAAG GCGGCCTGGT GCGTCTGGCC AGCGGCGAGG TGCGCGACAT CGACGAGGCG
GCCCTGCGCG AGGGCCGTGT CACCGCGCGC TGGTACGGCG AGCTGTGCGT GCCGCAGGAG
GGCGGTTACG TGCAGGCGGT CAAGCAGGGT GGAATGGAGT CTGAAGAGCT GGTGCTGGCC
GATCTGGCCG CCTGGCTGGA GGGCGAATGG GAACCGGGCG TGCGCTATGT GTTCGGTCCC
GGCTCGACCC TGCACGGCCT GGCGCAGAAT CTGGGGCTGG AGACCACCTT GCTCGGTGTC
GATGTGATCG AGGATGGCCA GGTGATCGCT CGCGACGTCA ATGAAGCCGA GCTGTTCGCT
CTCGTCGATG GGCATCCAAC TTACCTGCTG GTCACCGCCA TTGGCGGCCA GGGGCATATC
ATTGGTCGCG GCAATCAGCA GATCAGCCCG CGGGTGTTGC GCGCCGTCGG CCTGGAGCGC
CTGCGGGTGG TGGCGACCAA ACGCAAGCTG GCGACGCTGG AAGGGCGGCC GCTGCTGGTG
GACAGTGGCG ACGTGACGCT GGACGATGCC TTTCCCGATG CCGTGCGGGT CTGGGCAGGT
TACAAGGAAG AGTTGCTGTA TCCCTTGGCT CGATAG
 
Protein sequence
MARFHIGLII NPLAGLGGPA AFKGSDGMAE QALALGVEAK AAQRTRTALE QLLALRERIE 
FVSYPGAMGG ELLAQMGFEH RLLGELGDGA TTAEDTRRAV RQLQDAGVAL ILFAGGDGTA
RDVCAVVREG QPVLGIPAGV KIQSGVYAIS PRAAGELTAR LVEGGLVRLA SGEVRDIDEA
ALREGRVTAR WYGELCVPQE GGYVQAVKQG GMESEELVLA DLAAWLEGEW EPGVRYVFGP
GSTLHGLAQN LGLETTLLGV DVIEDGQVIA RDVNEAELFA LVDGHPTYLL VTAIGGQGHI
IGRGNQQISP RVLRAVGLER LRVVATKRKL ATLEGRPLLV DSGDVTLDDA FPDAVRVWAG
YKEELLYPLA R