| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2515 |
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| Symbol | |
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| ID | 5107982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2778571 |
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| End bp | 2780334 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640503759 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_001188003 |
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| Protein GI | 146307538 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.296095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCTC TGCTTTCCTC CCGCCAGCGT GGTGCGATAC GCCTGGCCTG GCGCTTTATC
GCGCCTTATC GCGGGCGGGT GCTGGGCGCC TTGCTGGCGC TGCTGTTTAC CGCCGCCATC
ACCCTGTCCA TGGGCCAGGG CATCAAGCTG CTGGTGGATC AGGGCCTGGC CACGCAATCG
CCGGCTGCGC TGCGTCAGTC CCTGCTGCTG TTCTTCGTGC TGGTGCTGGC TTTGGCGTTC
GGCACCTATA CGCGCTTCTA CCTGGTGTCC TGGCTGGGCG AGCGGGTGGT GGCCGATATT
CGCCGGCGGG TGTTCGATCA CCTGATCGAG CTGCATCCCG GCTTCTATGA AAGCAATCGC
AGCTCGGAGA TCCAGTCGCG GCTGACCGCC GATACCACCT TGCTGCAGTC GGTGATCGGC
TCGTCGCTGT CCATGGCCCT GCGCAATCTG ATCATGCTGC TCGGCGGCAG CGTGCTGCTG
GTGGTCACCA ACCCCAAATT GAGCGGTATC GTGCTGGCCG CGCTGCCGCT GGTGGTGGCG
CCGATCCTGC TGTTCGGCCG CCGTGTGCGG GCGCTGTCGC GGCAGAGCCA GGACCGTGTG
GCCGACGTGG GCAGCTATGT CGGCGAGGTG CTGGGGCAGG TCAAGACGGT GCAGGCTTAC
AACCATCAGG ACGAGGACAA GCGCCGTTTC GGGCTGTCCG CCGAGGCGGC CTTCGCCGTC
GCGCGCAAGC GTGTCGCCCA GCGTGCCTGG CTGATCACCG TGGTCATCGT GCTGGTGCTC
GGGGCGGTGG GCGTGATGCT CTGGGTCGGC GGCATGGACG TGATCGCCGG GCGCATTTCC
GGCGGAGAGC TGGCGGCCTT CGTCTTCTAC GCCCTGATCG TCGGCTCGTC GTTCGGTACC
CTGAGCGAGG TGATCGGTGA GCTGCAGCGC GCAGCCGGAG CGGCCGAGCG CATTGGCGAA
CTGCTCCGCG CGCGCAGTCA GATCGTCGCC CCCGCACAGC CGCAGCATCT GGCGCAGCCG
GTGCGTGGGC GTATCGAGTT GCAGGGTGTG CGCTTCGCCT ACCCGTCGCG GCCCGACAGC
TACGCCATCG ATGGTATCGA TCTGCAGGTG GCAGCGGGCG AGACCCTGGC GCTGGTCGGG
CCATCGGGGG CGGGCAAGTC GACGCTGTTC GATCTGCTGC TGCGCTTTTT CGACCCGCAG
GCCGGGCGCA TTCTCATCGA CGGTGTGCCG ATCGATCAGC TCGATCCGCG CGAGCTGCGC
GCCTGCTTCG CTCTGGTGTC GCAGAATCCG GCGCTGTTCT TCGGCACGGT GGAGGACAAC
ATTCGCTACG GCCGGCTCGA CGCCAGCCAG GCGGAGGTGG AGGCTGCCGC GCGTGCGGCG
CATGCCCATG AGTTCATCGA GCGTCTGCCG CAGGGTTATC AGAGCCATCT CGGTGAGGCA
GGGCTGGGGC TTTCCGGCGG GCAGCGTCAG CGTCTGGCCA TCGCCCGCGC CCTGCTGGCC
GATGCGCCGA TCCTGCTGCT CGACGAGGCC ACCAGCGCCC TGGATGCCGA GAGCGAGCAC
CTGATCCAGC AGGCGCTTCC TGCGCTGATG AGCGGGCGCA CCACGCTGGT GATCGCGCAC
CGGCTGGCCA CCGTCAAGCA GGCCGAACGC ATCGCGGTGA TCGAGCGCGG TCGCCTGGCG
GCCATCGGCA GCCATGCCCA GTTGCTCGCC GGCAGCCCGC TCTATGCGCG CCTGGCGCAG
CTGCAGTTCG GCGAGGCCGG CTAA
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| Protein sequence | MTSLLSSRQR GAIRLAWRFI APYRGRVLGA LLALLFTAAI TLSMGQGIKL LVDQGLATQS
PAALRQSLLL FFVLVLALAF GTYTRFYLVS WLGERVVADI RRRVFDHLIE LHPGFYESNR
SSEIQSRLTA DTTLLQSVIG SSLSMALRNL IMLLGGSVLL VVTNPKLSGI VLAALPLVVA
PILLFGRRVR ALSRQSQDRV ADVGSYVGEV LGQVKTVQAY NHQDEDKRRF GLSAEAAFAV
ARKRVAQRAW LITVVIVLVL GAVGVMLWVG GMDVIAGRIS GGELAAFVFY ALIVGSSFGT
LSEVIGELQR AAGAAERIGE LLRARSQIVA PAQPQHLAQP VRGRIELQGV RFAYPSRPDS
YAIDGIDLQV AAGETLALVG PSGAGKSTLF DLLLRFFDPQ AGRILIDGVP IDQLDPRELR
ACFALVSQNP ALFFGTVEDN IRYGRLDASQ AEVEAAARAA HAHEFIERLP QGYQSHLGEA
GLGLSGGQRQ RLAIARALLA DAPILLLDEA TSALDAESEH LIQQALPALM SGRTTLVIAH
RLATVKQAER IAVIERGRLA AIGSHAQLLA GSPLYARLAQ LQFGEAG
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