Gene Pmen_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_2513 
Symbol 
ID5107980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2777370 
End bp2777651 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content62% 
IMG OID640503757 
Producthypothetical protein 
Protein accessionYP_001188001 
Protein GI146307536 
COG category[S] Function unknown 
COG ID[COG3123] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.195334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.450057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGG TCAACGAGTA CTTCGACGGC ACCGTCAAAT CCATCGGCTT CGCCATGGCC 
GAAGGCCCTG CCACCATCGG CGTGATGGCC CCGGGCGAAT ACGAGTTCGG CACCAGCCAG
CTGGAAGTGA TGCACGTGGT GGCCGGCGCC CTGACCGTGA AACTGCCGGG CAGCGACAGC
TGGAGCACCT TCGAAGCCGG CAGCAACTTC ACCGTACCGG CCAACAGCAA GTTCCAGCTG
AAGGTCGCGG TGGATACCGC CTACCTCTGC GAATATCGCT AA
 
Protein sequence
MFKVNEYFDG TVKSIGFAMA EGPATIGVMA PGEYEFGTSQ LEVMHVVAGA LTVKLPGSDS 
WSTFEAGSNF TVPANSKFQL KVAVDTAYLC EYR