| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2504 |
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| Symbol | sdhB |
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| ID | 5107380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2769703 |
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| End bp | 2770410 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503748 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_001187992 |
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| Protein GI | 146307527 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.254354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.293663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAAG TCAGTGTTTA TCGCTACAAC CCGGAGAAAG ACGCGGCTCC GTTCATGCAG
GACTTCCAGA TCGACACCGG CGGCAAGGAC ATCATGGTCC TGGACGTGCT GGCGCTGATC
AAGGAACAGG ACGAAGGTTT CTCCTATCGT CGCTCCTGCC GCGAGGGCGT ATGCGGCTCG
GACGGCATGA ACATCAACGG CAAGAACGGC CTGGCCTGCA TCACCCCGCT GTCCGCAGCG
GGGCTGAAAG GTGGCAAGCT GGTGATTCGT CCGCTGCCGG GTCTGCCGGT CATTCGTGAC
CTGGTCGTCG ACATGAGCAT CTTCTACAAG CAGTACGAGA AGGTGCAGCC GTTCCTGCAG
AACGACACGC CGGCTCCGGC CATCGAGCGT CTGCAGTCGC CGGAAGAGCG CGAGAAGCTC
GACGGTCTGT ACGAGTGCAT CCTGTGCGCC TGCTGCTCGA CCAGCTGCCC GTCGTTCTGG
TGGAACCCGG ACAAGTTCCT CGGTCCCGCT GCGCTGCTGC AGGCCTATCG TTTCCTGGCC
GACAGCCGCG ACACCAAGAC CGCCGAGCGT CTGGCTTCGC TGGACGATCC GTTCAGCGTG
TTCCGCTGCC GCGGCATCAT GAACTGCGTC AACGTGTGCC CGAAGGGTCT GAACCCGACC
AAGGCAATTG GCCACGTGCG CAACATGCTG CTGCAGAGCG GTACCTGA
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| Protein sequence | MLQVSVYRYN PEKDAAPFMQ DFQIDTGGKD IMVLDVLALI KEQDEGFSYR RSCREGVCGS
DGMNINGKNG LACITPLSAA GLKGGKLVIR PLPGLPVIRD LVVDMSIFYK QYEKVQPFLQ
NDTPAPAIER LQSPEEREKL DGLYECILCA CCSTSCPSFW WNPDKFLGPA ALLQAYRFLA
DSRDTKTAER LASLDDPFSV FRCRGIMNCV NVCPKGLNPT KAIGHVRNML LQSGT
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