| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2503 |
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| Symbol | sucA |
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| ID | 5107379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2766621 |
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| End bp | 2769452 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640503747 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001187991 |
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| Protein GI | 146307526 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.858572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.126982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAA GCGTGATGCA GCGCATGTGG GACAGTGCCC ACCTATCCGG TGGCAACGCT
GCCTACGTGG AAGAGCTCTA CGAGCTCTAC CTGCACGATC CCAACGCTGT GCCAGAAGAA
TGGCGCACTT ACTTCCAGAA GTTGCCGACC GACGGCAGCG CTGCAACGGA CGTATCGCAT
TCGACCATTC GCGATCATTT CGTCCTGCTC GCCAAGAATT CGCGTCGTGC CCAGCCGGTT
TCCGCCGGGG CCGTCAGCAG CGAGCACGAA AAGAAGCAGG TGGAAGTGCT GCGCCTGATC
CAGGCCTACC GCATGCGTGG CCATCAGGCC GCCCAGCTCG ACCCTCTGGG TCTGTGGGTG
CGCACTGCGC CGTCTGATCT GTCGATCAAT CACTACGGCC TGACCGACGC AGACCTGGAC
ACCACGTTCC GTACCGGCGA GCTGTACATT GGCAAGGAAG AGGCAACGCT ACGTGAAATC
CGCGATGCGC TGCAGCAGAC ATATTGTCGC ACCATCGGCG CCGAGTTCAC CCACATCGTC
GACTCCGGCC AGCGCAACTG GTTCGCCCAG CGCCTGGAGA GCGTGCGTGG TCGTCCGCAG
TTCTCTCCCG AGGTGCGCGC CCACATCCTC GAGCGCGTCA CCGCTGCCGA AGGCCTGGAG
AAGTACTTGG GCACCAAATA CCCGGGCACC AAGCGTTTCG GTCTGGAAGG TGGCGAGAGC
CTGATCCCGC TGTTGGACGA GATCATTCAG CGCTCGGGTT CCTACGGCAC CAAGGAAGTG
GTCATCGGCA TGGCCCACCG CGGCCGTCTG AACGTTCTGG TCAACACCTT CGGCAAGAAC
CCGCGCGACC TGTTCGACGA GTTCGAGGGC AAGAAGACCG AAGGCCTGTC GTCCGGCGAC
GTGAAGTACC ACCAGGGCTT CTCCTCCAAC GTCATGACCC CGGGTGGCGA AGTGCACCTG
GCGCTGGCGT TCAACCCCTC GCACCTGGAA ATCGTTTCCC CGGTGGTCGA GGGGTCCGTG
CGTGCCCGTC AGGATCGTCG TAACGACGCC ACCGGCGACA AGGTGCTGCC GATTTCCATC
CACGGTGACG CGGCATTCGC CGGTCAGGGC GTGGTCATGG AAACCTTCCA GATGTCGCAG
ACCCGTGGCT ACAAGACGGG CGGCACCATC CACATCGTGA TCAATAACCA GGTTGGCTTC
ACCACCAGCC GTCCGGAAGA TGCGCGCTCG ACCGAATACG CCACCGACGT GGCGAAGATG
ATCCAGGCGC CGATCTTCCA CGTGAATGGC GATGATCCGG AAGCCGTGCT GTTCGTCACC
CAGCTGGCCG TCGACTACCG CATGCAGTAC AAGCGCGACG TGGTCATCGA CCTGGTCTGC
TACCGCCGCC GCGGCCACAA CGAGGCCGAC GAGCCGAACG GCACCCAGCC GCTGATGTAT
CAGCAGATCG CCAAGCAGCG CACCACCCGT GAGCTCTACG CCGACGCCCT GGTTGCCGCT
GGCGTGCAGA GCAGCGACGA CGTGCAGGCC AAGATCGACG ACTACCGTAC CGCGCTGGAC
AACGGCCAGC ACGTGGTCAA GAGCCTGGTC AAGGAGCCGA ACAAGGAGCT GTTCGTCGAC
TGGCGTCCGT ATCTGGGCCA CGCCTGGACC GCGCGTCACG ACACCCGTTT CGATCTGAAG
ACCCTGCAGG ATCTGTCCGC CAAGCTGCTG GAAATTCCGG AAGGTTTCCT GGTTCAGCGT
CAGGTGGCGA AGATCCTCGA AGACCGTCAG AAGATGGGCG CGGGCGGCTT GCCGATCAAC
TGGGGCTTCG CCGAGACCAT GGCCTACGCC ACGCTGCTGG TCGAAGGTCA CCCGATCCGC
ATGACCGGTC AGGACATCGG CCGTGGTACC TTCTCGCACC GTCATGCGGT GCTGCACAAC
CAGAAGGACG CCTCGACCTA CGTTCCGCTG AAGAACCTGT ACGAAGGTCA GCCGAAGTTC
GAGCTGTACG ATTCGTACCT CTCCGAGGAA GCAGTTCTGG CCTTCGAATA CGGCTATGCC
ACCACCACGC CGAACGCGCT GGTGATCTGG GAAGCTCAGT TCGGCGACTT CGCCAACGGC
GCCCAGGTGG TATTCGACCA GTTCATCTCC AGTGGCGAGC ACAAGTGGGG CCGTCTCTGC
GGTCTGACCG TTCTGCTGCC GCACGGCTAC GAAGGGCAGG GGCCTGAGCA CAGCTCGGCA
CGTCTGGAGC GCTATCTGCA GCTGTGCGCC GAGCACAACA TGCAGGTCTG CGTACCGACC
ACGCCGGCGC AGGTCTACCA CATGCTGCGT CGCCAGGTGA TCCGTCCGCT GCGCAAGCCG
CTGGTGGTGC TGACGCCGAA GTCGCTGCTG CGTCACAAGC TGGCCATCTC GACCCTGGAA
GATCTGGCCG AAGGCTCCTT CCAGACCGTC ATCGGCGAGA TCGATTCGCT GGACCCGAAA
AAGGTCGAGC GCATGATCCT GTGCAGCGGC AAGGTCTACT ACGACCTGCT GGAGAAGCGT
CGTGCCGAGG GTCGCGAGGA CATCGCCATC ATCCGTATCG AGCAGCTCTA TCCGTTCCCG
GAAGATGATC TGGCCGAGGC ACTGGCGCCG TACAAGAACC TCAAGCACAT CGTCTGGTGT
CAGGAAGAGC CGATGAACCA GGGCGCCTGG TACTGCAGTC AGCATCACAT GCGTCGCGTC
GCCACTGCGC ACAAGAAGGG CCTGTTCCTC GAGTACGCGG GCCGTGAGGC TTCGGCTGCG
CCGGCTTGCG GTTATGCCTC GATGCATGCC GAGCAGCAGG AAAAACTGCT GCAGGACGCC
TTTACTGTTT AA
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| Protein sequence | MQESVMQRMW DSAHLSGGNA AYVEELYELY LHDPNAVPEE WRTYFQKLPT DGSAATDVSH
STIRDHFVLL AKNSRRAQPV SAGAVSSEHE KKQVEVLRLI QAYRMRGHQA AQLDPLGLWV
RTAPSDLSIN HYGLTDADLD TTFRTGELYI GKEEATLREI RDALQQTYCR TIGAEFTHIV
DSGQRNWFAQ RLESVRGRPQ FSPEVRAHIL ERVTAAEGLE KYLGTKYPGT KRFGLEGGES
LIPLLDEIIQ RSGSYGTKEV VIGMAHRGRL NVLVNTFGKN PRDLFDEFEG KKTEGLSSGD
VKYHQGFSSN VMTPGGEVHL ALAFNPSHLE IVSPVVEGSV RARQDRRNDA TGDKVLPISI
HGDAAFAGQG VVMETFQMSQ TRGYKTGGTI HIVINNQVGF TTSRPEDARS TEYATDVAKM
IQAPIFHVNG DDPEAVLFVT QLAVDYRMQY KRDVVIDLVC YRRRGHNEAD EPNGTQPLMY
QQIAKQRTTR ELYADALVAA GVQSSDDVQA KIDDYRTALD NGQHVVKSLV KEPNKELFVD
WRPYLGHAWT ARHDTRFDLK TLQDLSAKLL EIPEGFLVQR QVAKILEDRQ KMGAGGLPIN
WGFAETMAYA TLLVEGHPIR MTGQDIGRGT FSHRHAVLHN QKDASTYVPL KNLYEGQPKF
ELYDSYLSEE AVLAFEYGYA TTTPNALVIW EAQFGDFANG AQVVFDQFIS SGEHKWGRLC
GLTVLLPHGY EGQGPEHSSA RLERYLQLCA EHNMQVCVPT TPAQVYHMLR RQVIRPLRKP
LVVLTPKSLL RHKLAISTLE DLAEGSFQTV IGEIDSLDPK KVERMILCSG KVYYDLLEKR
RAEGREDIAI IRIEQLYPFP EDDLAEALAP YKNLKHIVWC QEEPMNQGAW YCSQHHMRRV
ATAHKKGLFL EYAGREASAA PACGYASMHA EQQEKLLQDA FTV
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