| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2502 |
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| Symbol | |
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| ID | 5107378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2765323 |
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| End bp | 2766555 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640503746 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | YP_001187990 |
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| Protein GI | 146307525 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.932466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.125524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCG AGATCAAAGC CCCAACCTTC CCGGAATCGG TTGCCGACGG CACCGTCGCT
ACCTGGCATA AGAAGCCGGG CGAAGCGGTC AAGCGCGATG AGCTGATCGT CGACATCGAA
ACCGACAAGG TGGTGATCGA AGTCCTGGCC GAGGCCGACG GCGTACTGGC TGAAATCATC
AAGAACGAAG GCGACACCGT TCTTTCCAAC GAACTGCTGG GCAAGCTGAC CGAAGGTGGC
GCTGCCGCCG CTGCTCCGGC TGCCGCTCCG GCCGCTGCCG CTGCTCCGGC TCAGGCTGCG
GCTCCGGCCG CCGCCGCTGG TGACGACGCC ATCCTCTCGC CGGCCGCGCG CAAGCTGGCC
GAAGAGAACG GCATCGACCC GAACAGCATC GCCGGCACCG GCAAGGGCGG CCGTGTGACC
AAGGAAGACG TGGTCGCTGC CGTCGAAGCC AAGAAGAACG CTCCGGCTGC CGCACCGGCC
AAGCCGGCCG CTGCTCCTGC CGCAGAAGCT CCGGTAATCG CCACCGGCGA CCGTACCGAG
AAGCGCGTGC CGATGACCCG CCTGCGTGCC AAGATCGCCG AGCGTCTGGT CGAGGCTCAG
TCCTCCATGG CCATGCTGAC CACCTTCAAC GAAGTGGACA TGACCGAAGT CATGGCCCTG
CGTTCGAAGT ACAAGGACCT GTTCGAGAAG TCCCACAATG GCGTGCGCCT GGGCTTCATG
TCGTTCTTCG TCAAGGCCGC TACCGAGGCG CTGAAGCGCT TCCCGGCAGT CAACGCCTCG
ATCGACGGCA ACGACATCGT TTACCACGGC TATGCCGACA TCGGTGTTGC CGTGTCCAGC
GACCGTGGCC TGGTGGTTCC GGTGCTGCGC AACGCCGAGC TGATGAGCCT GGCTGAAATC
GAGAGCGGCA TTGCCACCTT CGGCAAGAAG GCGCGCGACG GCAAGCTGTC GATCGAAGAA
ATGACTGGCG GTACCTTCAC CATCACCAAC GGCGGTACTT TCGGTTCGAT GATGTCGACT
CCGATCGTCA ACCCGCCGCA GGCCGCGATC CTGGGTATGC ACAACATCAT CCAGCGCCCG
ATGGCGATCA ATGGTCAGGT GGTGATCCGT CCGATGATGT ATCTGGCGCT GTCTTACGAT
CACCGCCTGA TCGATGGTAA GGAAGCCGTG ACCTTCCTGG TGACCATCAA GAACTTGCTT
GAAGATCCGG CTCGCCTGCT GCTGGAAATC TAA
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| Protein sequence | MAIEIKAPTF PESVADGTVA TWHKKPGEAV KRDELIVDIE TDKVVIEVLA EADGVLAEII
KNEGDTVLSN ELLGKLTEGG AAAAAPAAAP AAAAAPAQAA APAAAAGDDA ILSPAARKLA
EENGIDPNSI AGTGKGGRVT KEDVVAAVEA KKNAPAAAPA KPAAAPAAEA PVIATGDRTE
KRVPMTRLRA KIAERLVEAQ SSMAMLTTFN EVDMTEVMAL RSKYKDLFEK SHNGVRLGFM
SFFVKAATEA LKRFPAVNAS IDGNDIVYHG YADIGVAVSS DRGLVVPVLR NAELMSLAEI
ESGIATFGKK ARDGKLSIEE MTGGTFTITN GGTFGSMMST PIVNPPQAAI LGMHNIIQRP
MAINGQVVIR PMMYLALSYD HRLIDGKEAV TFLVTIKNLL EDPARLLLEI
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