Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2493 |
Symbol | |
ID | 5107369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2757089 |
End bp | 2757535 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640503737 |
Product | thioesterase superfamily protein |
Protein accession | YP_001187981 |
Protein GI | 146307516 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0486038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.110001 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC TGAATCTGGA ACAACTGGTG GCGCGCGCGC ACCAGCAGAA CGACTACGAC CCGCTGATCA ACCTGATCCC CTACGCCAAG CTGCTGGGCA TCGAATGCCT GCGCCTGGGC GATGACATGG TCTTTCGCCT GCCGGCCAAC CGCGACTGCA TCGGTAACCC GGTGCTGCCG GCCCTGCACG GCGGGGTGAT CGCCGGTTTC ATGGAGCATG CGGCCATGCT TCATCTGCTG ATGTTCATGG GCATTCCACA TTTGCCGAAA ATCATCGACT TCTCGATAGA TTACCTGCGC GCCGGCCATT ATCGTGACAC CTACGCGCAA TGCCAGGTCT GGCGCCAGGG GCGACGCGTC GCCAACGTAG CGATCACCGC CTGGCAGACC ACCCAGACCG AACCTATCGC CACCGCTCGC GCCCACTTCA AGGTCGATGA GCCTTAA
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Protein sequence | MSELNLEQLV ARAHQQNDYD PLINLIPYAK LLGIECLRLG DDMVFRLPAN RDCIGNPVLP ALHGGVIAGF MEHAAMLHLL MFMGIPHLPK IIDFSIDYLR AGHYRDTYAQ CQVWRQGRRV ANVAITAWQT TQTEPIATAR AHFKVDEP
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